BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_4523_orf1
(157 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|336368965|gb|EGN97307.1| hypothetical protein SERLA73DRAFT_16... 36 2.2
gi|218529327|ref|YP_002420143.1| alkanesulfonate monooxygenase [... 36 2.4
gi|242815206|ref|XP_002486524.1| MGMT family protein [Talaromyce... 35 4.6
gi|327311664|ref|YP_004338561.1| flavin reductase domain-contain... 35 4.8
gi|296170317|ref|ZP_06851908.1| acyl-CoA dehydrogenase domain pr... 34 6.3
gi|163759191|ref|ZP_02166277.1| indolepyruvate ferredoxin oxidor... 34 8.6
>gi|336368965|gb|EGN97307.1| hypothetical protein SERLA73DRAFT_169686 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381744|gb|EGO22895.1| hypothetical protein SERLADRAFT_450619 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1261
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 7 NLVKQFESLRDRQWGDFPVIHATLSELASESPPTQALKEKVLGQPVGQCTTASAASVGLE 66
NLV+ FE+++ P + T + + E P Q++ V P + +
Sbjct: 801 NLVQWFEAIKSTLVD--PSVSPTWTPVEFEDKPLQSILHAV---PESEDKARPGIVIRQA 855
Query: 67 GDSAEPFSFADARLDFHKLRVRVAPWLQVVGASGFLSEWGPGARVKDAAI 116
GDSA + D+RLDFH +R RV VG G W ++ I
Sbjct: 856 GDSAVLVEYGDSRLDFH-MRARVHALETEVGKRGVKGVWAFAPCIRSTMI 904
>gi|218529327|ref|YP_002420143.1| alkanesulfonate monooxygenase [Methylobacterium chloromethanicum
CM4]
gi|218521630|gb|ACK82215.1| Alkanesulfonate monooxygenase [Methylobacterium chloromethanicum
CM4]
Length = 365
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 2 PKQLLNLVKQFESLRDRQWGDFPVIHA------TLSELASESPPTQALKEKVL-----GQ 50
P+ L+L +R W I A T LAS +PP ++L GQ
Sbjct: 225 PRFSLSLRPILAETEERAWARAEAILAQTRRLRTARGLASAAPPQNEGSRRLLAAAAEGQ 284
Query: 51 PVGQC-TTASAASVGLEGDSA----EPFSFADARLDFHKLRVRV 89
+ +C TA AA G G+S P ADA LD+H L VR
Sbjct: 285 RLDKCLYTAIAAETGASGNSTALVGTPEQVADALLDYHDLGVRT 328
>gi|242815206|ref|XP_002486524.1| MGMT family protein [Talaromyces stipitatus ATCC 10500]
gi|218714863|gb|EED14286.1| MGMT family protein [Talaromyces stipitatus ATCC 10500]
Length = 165
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 13/111 (11%)
Query: 23 FPVIHATLSELASESPPTQALKEKVLGQP-----VGQC--------TTASAASVGLEGDS 69
F ++ + E+ T ++LG P VG C T ++++ G +S
Sbjct: 11 FNAVYEAVQEIPLGCVTTYGHIARLLGYPRRARQVGICLKHLPSNRTNRTSSAKGGGDES 70
Query: 70 AEPFSFADARLDFHKLRVRVAPWLQVVGASGFLSEWGPGARVKDAAILAHQ 120
AE + +H PW +VV + G +S GPG+ + A L H+
Sbjct: 71 AEEDENDEQGEIYHHFHDDNVPWQRVVNSKGTISHRGPGSASRQAVALRHE 121
>gi|327311664|ref|YP_004338561.1| flavin reductase domain-containing protein [Thermoproteus
uzoniensis 768-20]
gi|326948143|gb|AEA13249.1| flavin reductase domain protein, FMN-binding protein [Thermoproteus
uzoniensis 768-20]
Length = 188
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 64 GLEGDSAEPFSFADARLDFHKLRVRVAPWLQVVGASGFLSEWGPGARVKDAAILAHQIGR 123
GL+G A + A+LD ++R+ V L+V A G + EWGP + +L H GR
Sbjct: 112 GLDGSIAVYEARVTAKLDIGEVRLYVFEVLKVKVAQGLVDEWGP--VLDKTNLLLHGAGR 169
Query: 124 RF 125
F
Sbjct: 170 VF 171
>gi|296170317|ref|ZP_06851908.1| acyl-CoA dehydrogenase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295895040|gb|EFG74759.1| acyl-CoA dehydrogenase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 352
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 106 GPGARVKDAAILAHQIGRRFAAFPSADPECCADFISRLNGGWLDGAAG 153
G GA + D ++A +IGR A P D C A + RL G +GAAG
Sbjct: 69 GDGATLVDLTLVAEEIGRSLAPVPWIDHVCTARLLGRL-GALAEGAAG 115
>gi|163759191|ref|ZP_02166277.1| indolepyruvate ferredoxin oxidoreductase [Hoeflea phototrophica
DFL-43]
gi|162283595|gb|EDQ33880.1| indolepyruvate ferredoxin oxidoreductase [Hoeflea phototrophica
DFL-43]
Length = 1139
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 13 ESLRDRQWGDFPVIHATLSELASESPPTQALK-EKVLGQPVGQCTTASAASVGLEGDSAE 71
+SL+DR GDF ++H + S T+ ++ G +G + A GL G + +
Sbjct: 1009 QSLQDRFEGDFRIMHHFAPPMLSSGTDTRGRPLKRAFGPAIGPVLSLLARLKGLRGTAFD 1068
Query: 72 PFSF-ADARLD------FHKLRVRVAP---------WLQVVGASGFLSEWGPGARVKDAA 115
PFS+ A+ R++ F L R W QV+ A + +GP VK AA
Sbjct: 1069 PFSYTAERRMERGLIVWFEALMGRCEHEIHSGNADIWRQVLSAPMEIRGYGP---VKHAA 1125
Query: 116 I 116
+
Sbjct: 1126 V 1126
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.319 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,521,145,581
Number of extensions: 55341838
Number of successful extensions: 129364
Number of sequences better than 10.0: 13
Number of HSP's gapped: 130477
Number of HSP's successfully gapped: 13
Length of query: 157
Length of database: 5,058,227,080
Length adjustment: 119
Effective length of query: 38
Effective length of database: 3,299,676,972
Effective search space: 125387724936
Effective search space used: 125387724936
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)