BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_4181_orf2
(212 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|237832757|ref|XP_002365676.1| protein transport protein Sec61... 252 2e-65
gi|209879628|ref|XP_002141254.1| protein-transport Sec61 protein... 238 5e-61
gi|67591486|ref|XP_665568.1| Pfsec61 [Cryptosporidium hominis TU... 238 6e-61
gi|66362634|ref|XP_628283.1| Sec61; signal peptide plus 9 transm... 238 6e-61
gi|294944489|ref|XP_002784281.1| protein transport protein Sec61... 225 3e-57
gi|294941027|ref|XP_002782976.1| protein transport protein Sec61... 225 3e-57
gi|83314515|ref|XP_730393.1| hypothetical protein [Plasmodium yo... 225 3e-57
gi|211939926|gb|ACJ13443.1| pfsec61 [Karlodinium veneficum] 224 7e-57
gi|3057044|gb|AAC38988.1| PfSec61 [Plasmodium falciparum] 224 8e-57
gi|124513638|ref|XP_001350175.1| Sec61 alpha subunit, PfSec61 [P... 223 2e-56
gi|301093744|ref|XP_002997717.1| protein transporter Sec61 subun... 223 2e-56
gi|68069049|ref|XP_676435.1| Pfsec61 [Plasmodium berghei strain ... 222 2e-56
gi|67983419|ref|XP_669074.1| hypothetical protein [Plasmodium be... 222 3e-56
gi|298710680|emb|CBJ32105.1| putative Sec61/secY [Ectocarpus sil... 221 6e-56
gi|70949576|ref|XP_744185.1| Pfsec61 [Plasmodium chabaudi chabau... 220 9e-56
gi|122890312|emb|CAJ73364.1| Sec61 protein [Guillardia theta] 219 2e-55
gi|156082373|ref|XP_001608671.1| protein transport protein sec61... 219 3e-55
gi|224011567|ref|XP_002295558.1| protein translocase complex sub... 218 3e-55
gi|219129623|ref|XP_002184983.1| transport protein Sec61 alpha s... 217 9e-55
gi|71026625|ref|XP_762976.1| protein transport protein Sec61 [Th... 214 7e-54
gi|325185011|emb|CCA19502.1| Sec61 alpha 1 subunit putative [Alb... 211 5e-53
gi|168033838|ref|XP_001769421.1| predicted protein [Physcomitrel... 211 7e-53
gi|222624444|gb|EEE58576.1| hypothetical protein OsJ_09896 [Oryz... 210 1e-52
gi|168060426|ref|XP_001782197.1| predicted protein [Physcomitrel... 209 1e-52
gi|15226261|ref|NP_180972.1| protein transport protein SEC61 sub... 209 2e-52
gi|302811860|ref|XP_002987618.1| hypothetical protein SELMODRAFT... 209 2e-52
gi|186479015|ref|NP_174225.2| SecY protein transport family prot... 209 2e-52
gi|21593089|gb|AAM65038.1| putative protein transport protein SE... 209 2e-52
gi|302803155|ref|XP_002983331.1| hypothetical protein SELMODRAFT... 209 3e-52
gi|226528621|ref|NP_001146689.1| hypothetical protein LOC1002802... 209 3e-52
>gi|237832757|ref|XP_002365676.1| protein transport protein Sec61 alpha subunit isoform 1, putative
[Toxoplasma gondii ME49]
gi|211963340|gb|EEA98535.1| protein transport protein Sec61 alpha subunit isoform 1, putative
[Toxoplasma gondii ME49]
gi|221488133|gb|EEE26347.1| protein transport protein Sec61 alpha subunit isoform, putative
[Toxoplasma gondii GT1]
gi|221508650|gb|EEE34219.1| protein transport protein Sec61 alpha subunit isoform, putative
[Toxoplasma gondii VEG]
gi|325118328|emb|CBZ53879.1| hypothetical protein NCLIV_036610 [Neospora caninum Liverpool]
Length = 473
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 133/143 (93%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
MAKG RFL+L+KP MC+LPEV AP+R++ F+EKVLWTL++LAVFL+CCQIPL+GIR +
Sbjct: 1 MAKGFRFLNLIKPVMCILPEVQAPDRKIPFKEKVLWTLVSLAVFLICCQIPLYGIRTNKS 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSL+EDRALFQGAQK
Sbjct: 61 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLKEDRALFQGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL L+IT+ EAVAYVISGMYG +
Sbjct: 121 LLGLIITVGEAVAYVISGMYGDI 143
>gi|209879628|ref|XP_002141254.1| protein-transport Sec61 protein subunit alpha [Cryptosporidium
muris RN66]
gi|209556860|gb|EEA06905.1| protein-transport Sec61 protein subunit alpha, putative
[Cryptosporidium muris RN66]
Length = 473
Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/143 (77%), Positives = 129/143 (90%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
MAKG+RFL+L+KPA+CVLPEV P+RRV F+E+VLWTL++L VFLVCCQIP++G+ +
Sbjct: 1 MAKGLRFLNLIKPALCVLPEVSPPDRRVPFKERVLWTLISLFVFLVCCQIPIYGVLSSKS 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYWMRVILASNRGTLMELGISPIVTS MVMQLLAGS+II VDQSL+EDRALFQGAQK
Sbjct: 61 SDPFYWMRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRALFQGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
L LLIT+ EAVAYVISGMYG +
Sbjct: 121 LFGLLITLGEAVAYVISGMYGDI 143
>gi|67591486|ref|XP_665568.1| Pfsec61 [Cryptosporidium hominis TU502]
gi|54656318|gb|EAL35337.1| Pfsec61 [Cryptosporidium hominis]
Length = 473
Score = 238 bits (606), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/143 (76%), Positives = 130/143 (90%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
MAKG+RFL+L+KPA+CV+PEV +P+RRV F+E+VLWTL++L VFLVCCQIPL+G+ +
Sbjct: 1 MAKGLRFLNLIKPALCVIPEVSSPDRRVPFKERVLWTLISLFVFLVCCQIPLYGVLSSKS 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYW+RVILASNRGTLMELGISPIVTS MVMQLLAGS+II VDQSL+EDRALFQGAQK
Sbjct: 61 SDPFYWVRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRALFQGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
L LLIT+ EAVAYVISGMYG +
Sbjct: 121 LFGLLITLGEAVAYVISGMYGDI 143
>gi|66362634|ref|XP_628283.1| Sec61; signal peptide plus 9 transmembrane domain-containing
protein [Cryptosporidium parvum Iowa
gi|46229751|gb|EAK90569.1| putative Sec61; signal peptide plus 9 transmembrane
domain-containing protein [Cryptosporidium parvum Iowa
II]
Length = 473
Score = 238 bits (606), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/143 (76%), Positives = 130/143 (90%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
MAKG+RFL+L+KPA+CV+PEV +P+RRV F+E+VLWTL++L VFLVCCQIPL+G+ +
Sbjct: 1 MAKGLRFLNLIKPALCVIPEVSSPDRRVPFKERVLWTLISLFVFLVCCQIPLYGVLSSKS 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYW+RVILASNRGTLMELGISPIVTS MVMQLLAGS+II VDQSL+EDRALFQGAQK
Sbjct: 61 SDPFYWVRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRALFQGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
L LLIT+ EAVAYVISGMYG +
Sbjct: 121 LFGLLITLGEAVAYVISGMYGDI 143
>gi|294944489|ref|XP_002784281.1| protein transport protein Sec61 subunit alpha, putative [Perkinsus
marinus ATCC 50983]
gi|239897315|gb|EER16077.1| protein transport protein Sec61 subunit alpha, putative [Perkinsus
marinus ATCC 50983]
Length = 422
Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 124/139 (89%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL LV+PAM ++PEV +P+RR+ F+EK+LWT +AL ++LVCCQIPL+GI + ADPF
Sbjct: 1 MRFLDLVRPAMFLMPEVASPDRRIPFKEKILWTAMALFIYLVCCQIPLYGIATNKNADPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPI+TSGMVMQLLAGS+II+VDQSL+EDRALF GAQKLL +
Sbjct: 61 YWMRVILASNRGTLMELGISPIITSGMVMQLLAGSKIIEVDQSLKEDRALFNGAQKLLGI 120
Query: 194 LITIXEAVAYVISGMYGPV 212
LIT+ EA AYV+SGMYG V
Sbjct: 121 LITLGEAAAYVMSGMYGDV 139
>gi|294941027|ref|XP_002782976.1| protein transport protein Sec61 subunit alpha isoform, putative
[Perkinsus marinus ATCC 50983]
gi|239895158|gb|EER14772.1| protein transport protein Sec61 subunit alpha isoform, putative
[Perkinsus marinus ATCC 50983]
Length = 470
Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 124/139 (89%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL LV+PAM ++PEV +P+RR+ F+EK+LWT +AL ++LVCCQIPL+GI + ADPF
Sbjct: 1 MRFLDLVRPAMFLMPEVASPDRRIPFKEKILWTAMALFIYLVCCQIPLYGIATNKNADPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPI+TSGMVMQLLAGS+II+VDQSL+EDRALF GAQKLL +
Sbjct: 61 YWMRVILASNRGTLMELGISPIITSGMVMQLLAGSKIIEVDQSLKEDRALFNGAQKLLGI 120
Query: 194 LITIXEAVAYVISGMYGPV 212
LIT+ EA AYV+SGMYG V
Sbjct: 121 LITLGEAAAYVMSGMYGDV 139
>gi|83314515|ref|XP_730393.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23490103|gb|EAA21958.1| PfSec61 [Plasmodium yoelii yoelii]
Length = 519
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 126/140 (90%)
Query: 71 AKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGA 130
AK +RFL+L+KPAM +LPEV +P+R++ F+EK+LWT ++L VFL+CCQIPL+GI + +
Sbjct: 46 AKMVRFLNLLKPAMFLLPEVQSPDRKLPFKEKLLWTAVSLFVFLICCQIPLYGIITSKSS 105
Query: 131 DPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKL 190
DPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGS+II VDQSL+EDR LFQGAQKL
Sbjct: 106 DPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIDVDQSLKEDRTLFQGAQKL 165
Query: 191 LALLITIXEAVAYVISGMYG 210
L LLIT+ EA+AYV+SG+YG
Sbjct: 166 LGLLITLGEAIAYVVSGIYG 185
>gi|211939926|gb|ACJ13443.1| pfsec61 [Karlodinium veneficum]
Length = 473
Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 101/143 (70%), Positives = 125/143 (87%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M+ G RFLSL+KPAMCVLPEV P+RR+ F+E++LW+ ++L +FLVCCQIPL+G+ +
Sbjct: 1 MSSGFRFLSLIKPAMCVLPEVSPPDRRIQFKERLLWSSISLFIFLVCCQIPLYGVTMSKS 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
DPFY+MRVILASNRGTLMELG++PI+TSGMVMQLLAGSRII VDQS++EDR L+QGAQK
Sbjct: 61 GDPFYFMRVILASNRGTLMELGVTPIITSGMVMQLLAGSRIIDVDQSVKEDRNLYQGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
L A LIT+ EAVAYV+SGMYG +
Sbjct: 121 LFAFLITLGEAVAYVMSGMYGSL 143
>gi|3057044|gb|AAC38988.1| PfSec61 [Plasmodium falciparum]
Length = 472
Score = 224 bits (570), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 124/139 (89%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL+L+KP M +LPEV +P+RR+ F+EK+LWT ++L VFL+CCQIPL+GI + +DPF
Sbjct: 2 VRFLNLIKPVMFLLPEVQSPDRRLPFKEKLLWTAVSLFVFLICCQIPLYGIVTSKSSDPF 61
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGS+II VDQSL+EDR LFQGAQKLL L
Sbjct: 62 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIDVDQSLKEDRTLFQGAQKLLGL 121
Query: 194 LITIXEAVAYVISGMYGPV 212
LIT+ EA+AYVISG+YG +
Sbjct: 122 LITLGEAIAYVISGIYGNI 140
>gi|124513638|ref|XP_001350175.1| Sec61 alpha subunit, PfSec61 [Plasmodium falciparum 3D7]
gi|23615592|emb|CAD52584.1| Sec61 alpha subunit, PfSec61 [Plasmodium falciparum 3D7]
Length = 472
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/139 (73%), Positives = 124/139 (89%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL+L+KP M +LPEV +P+R++ F+EK+LWT ++L VFL+CCQIPL+GI + +DPF
Sbjct: 2 VRFLNLIKPVMFLLPEVQSPDRKLPFKEKLLWTAVSLFVFLICCQIPLYGIVTSKSSDPF 61
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGS+II VDQSL+EDR LFQGAQKLL L
Sbjct: 62 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIDVDQSLKEDRTLFQGAQKLLGL 121
Query: 194 LITIXEAVAYVISGMYGPV 212
LIT+ EA+AYVISG+YG +
Sbjct: 122 LITLGEAIAYVISGIYGNI 140
>gi|301093744|ref|XP_002997717.1| protein transporter Sec61 subunit alpha, putative [Phytophthora
infestans T30-4]
gi|262109966|gb|EEY68018.1| protein transporter Sec61 subunit alpha, putative [Phytophthora
infestans T30-4]
Length = 474
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 123/139 (88%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL L++P MCVLPEV P+R++ FREKVLWT++ L +FLVCCQIPL+GI+ + +DP
Sbjct: 1 MRFLHLIRPVMCVLPEVAQPDRKIPFREKVLWTIITLFIFLVCCQIPLYGIQTSKSSDPL 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSG+VMQLLAGS++I+VDQSL+EDRALF GAQKL +
Sbjct: 61 YWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSKMIEVDQSLKEDRALFSGAQKLFGI 120
Query: 194 LITIXEAVAYVISGMYGPV 212
LIT+ EAVAYV+SGMYG +
Sbjct: 121 LITLGEAVAYVVSGMYGNI 139
>gi|68069049|ref|XP_676435.1| Pfsec61 [Plasmodium berghei strain ANKA]
gi|56496131|emb|CAH97174.1| Pfsec61, putative [Plasmodium berghei]
Length = 471
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 124/137 (90%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL+L+KPAM +LPEV +P+R++ F+EK+LWT ++L VFL+CCQIPL+GI + +DPF
Sbjct: 1 VRFLNLLKPAMFLLPEVQSPDRKLPFKEKLLWTAVSLFVFLICCQIPLYGIITSKSSDPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGS+II VDQSL+EDR LFQGAQKLL L
Sbjct: 61 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIDVDQSLKEDRTLFQGAQKLLGL 120
Query: 194 LITIXEAVAYVISGMYG 210
LIT+ EA+AYV+SG+YG
Sbjct: 121 LITLGEAIAYVVSGIYG 137
>gi|67983419|ref|XP_669074.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482780|emb|CAI03279.1| hypothetical protein PB301116.00.0 [Plasmodium berghei]
Length = 153
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 125/137 (91%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL+L+KPAM +LPEV +P+R++ F+EK+LWT ++L VFL+CCQIPL+GI + +DPF
Sbjct: 1 VRFLNLLKPAMFLLPEVQSPDRKLPFKEKLLWTAVSLFVFLICCQIPLYGIITSKSSDPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGS+II VDQSL+EDR LFQGAQKLLAL
Sbjct: 61 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIDVDQSLKEDRTLFQGAQKLLAL 120
Query: 194 LITIXEAVAYVISGMYG 210
LIT+ EA+AYV+SG+YG
Sbjct: 121 LITLGEAIAYVVSGIYG 137
>gi|298710680|emb|CBJ32105.1| putative Sec61/secY [Ectocarpus siliculosus]
Length = 472
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 122/137 (89%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL L++P MCVLPEV P+R++ FREKVLWT++ L +FLVCCQIP++G++ + +DPF
Sbjct: 1 MRFLHLIRPVMCVLPEVAQPDRKIPFREKVLWTVITLFIFLVCCQIPIYGVQSAKSSDPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTS +VMQLLAGSRII+V+QS++EDRALF GAQKL +
Sbjct: 61 YWMRVILASNRGTLMELGISPIVTSSLVMQLLAGSRIIEVNQSIKEDRALFSGAQKLFGI 120
Query: 194 LITIXEAVAYVISGMYG 210
LITI EAVAYV+SGMYG
Sbjct: 121 LITIGEAVAYVVSGMYG 137
>gi|70949576|ref|XP_744185.1| Pfsec61 [Plasmodium chabaudi chabaudi]
gi|56524034|emb|CAH76875.1| Pfsec61, putative [Plasmodium chabaudi chabaudi]
Length = 470
Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 101/137 (73%), Positives = 123/137 (89%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL+L+KP M +LPEV +P+R++ F+EK+LWT ++L VFL+CCQIPL+GI + +DPF
Sbjct: 1 VRFLNLLKPVMFMLPEVQSPDRKLPFKEKLLWTAVSLFVFLICCQIPLYGIVTSKSSDPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGS+II VDQSL+EDR LFQGAQKLL L
Sbjct: 61 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIDVDQSLKEDRTLFQGAQKLLGL 120
Query: 194 LITIXEAVAYVISGMYG 210
LIT+ EA+AYV+SG+YG
Sbjct: 121 LITLGEAIAYVVSGIYG 137
>gi|122890312|emb|CAJ73364.1| Sec61 protein [Guillardia theta]
Length = 481
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 122/142 (85%)
Query: 71 AKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGA 130
KG+RFLSLVKP M +LPEV + +++V +EK+LWT++ L ++LVCCQIPL+GI + +
Sbjct: 4 TKGVRFLSLVKPFMFILPEVTSSQKKVPIKEKILWTMITLFIYLVCCQIPLYGISNSKSS 63
Query: 131 DPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKL 190
DPFYWMRVILASN+GTLMELGISP+VTSG++MQLLAGSRII VDQ +ED+ LFQGAQKL
Sbjct: 64 DPFYWMRVILASNKGTLMELGISPVVTSGLIMQLLAGSRIIDVDQGTKEDKTLFQGAQKL 123
Query: 191 LALLITIXEAVAYVISGMYGPV 212
L +LITI EAVAYV+SGMYG V
Sbjct: 124 LGILITIVEAVAYVLSGMYGDV 145
>gi|156082373|ref|XP_001608671.1| protein transport protein sec61 [Babesia bovis T2Bo]
gi|154795920|gb|EDO05103.1| protein transport protein sec61, putative [Babesia bovis]
Length = 480
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 122/144 (84%)
Query: 69 KMAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGR 128
KMAKG RFL+L+KP M +LPE+ P R+V F+E ++WT ++L VFLVCCQIP++G +
Sbjct: 4 KMAKGFRFLNLIKPIMPILPEIRTPTRKVPFKEMLMWTGVSLFVFLVCCQIPIYGAVTNK 63
Query: 129 GADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQ 188
+DPFYWMRVILASNRGTLMELGISPIVTS MVMQLLAGS+II VDQSL+EDR L+Q A+
Sbjct: 64 SSDPFYWMRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRDLYQAAE 123
Query: 189 KLLALLITIXEAVAYVISGMYGPV 212
KL LL+T+ EAVAYV+SGMYGPV
Sbjct: 124 KLFGLLVTLGEAVAYVVSGMYGPV 147
>gi|224011567|ref|XP_002295558.1| protein translocase complex subunit [Thalassiosira pseudonana
CCMP1335]
gi|209583589|gb|ACI64275.1| protein translocase complex subunit [Thalassiosira pseudonana
CCMP1335]
Length = 473
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 121/137 (88%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL L++P MCVLPEV P+R++ FREKVLWT + L +FLVCCQIP++G++ + +DPF
Sbjct: 1 MRFLHLIRPMMCVLPEVQNPDRKIPFREKVLWTTITLFIFLVCCQIPIYGVQSAKSSDPF 60
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSG+VMQLLAGSRII+V+ +++EDRALF GAQKL +
Sbjct: 61 YWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVNYNVKEDRALFAGAQKLFGI 120
Query: 194 LITIXEAVAYVISGMYG 210
LIT+ EA+AYV+SGMYG
Sbjct: 121 LITVGEAIAYVVSGMYG 137
>gi|219129623|ref|XP_002184983.1| transport protein Sec61 alpha subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217403478|gb|EEC43430.1| transport protein Sec61 alpha subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 559
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 121/137 (88%)
Query: 74 IRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPF 133
+RFL L++P MCVLPEV +P+R++ FREK+LWT + L +FLVCCQIP++G++ + +DPF
Sbjct: 88 MRFLHLIRPVMCVLPEVASPDRKIPFREKLLWTTITLFIFLVCCQIPIYGVQSAKSSDPF 147
Query: 134 YWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLAL 193
YWMRVILASNRGTLMELGISPIVTSG+VMQLLAGSRII+VD +++EDRALF GAQKL +
Sbjct: 148 YWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVDYNVKEDRALFSGAQKLFGI 207
Query: 194 LITIXEAVAYVISGMYG 210
LIT EA+AYV+SGMYG
Sbjct: 208 LITTGEAIAYVVSGMYG 224
>gi|71026625|ref|XP_762976.1| protein transport protein Sec61 [Theileria parva strain Muguga]
gi|68349928|gb|EAN30693.1| protein transport protein Sec61, putative [Theileria parva]
Length = 476
Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M KG R L+L+KP M +LPEV P R+VLF+E ++WT ++L +FLVCCQIP++G +
Sbjct: 1 MGKGFRVLNLIKPIMPILPEVKTPTRKVLFKEMLMWTGMSLFIFLVCCQIPIYGAITNKS 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYWMRVILASNRGTLMELGISPIVTS MVMQLLAGS+II VDQSL+EDR L+Q A+K
Sbjct: 61 SDPFYWMRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRDLYQAAEK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL LL+T+ EAVAYV+SGMYG V
Sbjct: 121 LLGLLVTLGEAVAYVVSGMYGDV 143
>gi|325185011|emb|CCA19502.1| Sec61 alpha 1 subunit putative [Albugo laibachii Nc14]
Length = 464
Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/129 (75%), Positives = 115/129 (89%)
Query: 84 MCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRGADPFYWMRVILASN 143
MCVLPEV P+R++ FREKVLWTL+ L +FLVCCQIPL+GI+ + +DP YWMRVILASN
Sbjct: 1 MCVLPEVAQPDRKIPFREKVLWTLITLFIFLVCCQIPLYGIQTSKSSDPLYWMRVILASN 60
Query: 144 RGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQKLLALLITIXEAVAY 203
RGTLMELGISPIVTSG+VMQL+AGS++I+VDQSL+EDRALF GAQKL +LIT+ EAVAY
Sbjct: 61 RGTLMELGISPIVTSGLVMQLMAGSKMIEVDQSLKEDRALFSGAQKLFGILITLGEAVAY 120
Query: 204 VISGMYGPV 212
V+SGMYG V
Sbjct: 121 VVSGMYGNV 129
>gi|168033838|ref|XP_001769421.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679341|gb|EDQ65790.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 477
Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/143 (69%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + VLPEV ERRV FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGGGFRVLHLVRPFLSVLPEVQTAERRVPFREKVMYTVVSLFIFLVCSQLPLYGIHSATG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS++I+VD S+REDRAL GAQK
Sbjct: 61 SDPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKLIEVDNSVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LITI EAVAYV+SGMYG V
Sbjct: 121 LLGVLITIGEAVAYVLSGMYGDV 143
>gi|222624444|gb|EEE58576.1| hypothetical protein OsJ_09896 [Oryza sativa Japonica Group]
Length = 549
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/145 (68%), Positives = 120/145 (82%)
Query: 68 RKMAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGG 127
KMA G R L LV+P + LPEV + +R++ FREKV++T+++L +FLVC Q+PL+GI
Sbjct: 73 EKMAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHST 132
Query: 128 RGADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGA 187
GADPFYWMRVILASNRGT+MELGI+PIVTSGMVMQLL GS+II+VD S+REDRAL GA
Sbjct: 133 TGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGA 192
Query: 188 QKLLALLITIXEAVAYVISGMYGPV 212
QKLL +LI I EAVAYV+SGMYG V
Sbjct: 193 QKLLGILIAIGEAVAYVLSGMYGSV 217
>gi|168060426|ref|XP_001782197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666363|gb|EDQ53020.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 477
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + VLPEV ER+V FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGGGFRVLHLVRPFLSVLPEVQTAERKVPFREKVMYTVVSLFIFLVCSQLPLYGIHSATG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS++I+VD S+REDRAL GAQK
Sbjct: 61 SDPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKLIEVDNSVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LITI EAVAYV+SGMYG V
Sbjct: 121 LLGVLITIGEAVAYVLSGMYGDV 143
>gi|15226261|ref|NP_180972.1| protein transport protein SEC61 subunit alpha [Arabidopsis
thaliana]
gi|79324249|ref|NP_001031476.1| protein transport protein SEC61 subunit alpha [Arabidopsis
thaliana]
gi|297823211|ref|XP_002879488.1| hypothetical protein ARALYDRAFT_482367 [Arabidopsis lyrata subsp.
lyrata]
gi|13605799|gb|AAK32885.1|AF367298_1 At2g34250/F13P17.9 [Arabidopsis thaliana]
gi|3337356|gb|AAC27401.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis
thaliana]
gi|21593809|gb|AAM65776.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis
thaliana]
gi|23308213|gb|AAN18076.1| At2g34250/F13P17.9 [Arabidopsis thaliana]
gi|222423809|dbj|BAH19870.1| AT2G34250 [Arabidopsis thaliana]
gi|297325327|gb|EFH55747.1| hypothetical protein ARALYDRAFT_482367 [Arabidopsis lyrata subsp.
lyrata]
gi|330253849|gb|AEC08943.1| protein transport protein SEC61 subunit alpha [Arabidopsis
thaliana]
gi|330253850|gb|AEC08944.1| protein transport protein SEC61 subunit alpha [Arabidopsis
thaliana]
Length = 475
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + LPEV + +R+V FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
ADPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS+II+VD ++REDRAL GAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LI I EAVAYV+SGMYGPV
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGPV 143
>gi|302811860|ref|XP_002987618.1| hypothetical protein SELMODRAFT_271933 [Selaginella moellendorffii]
gi|300144510|gb|EFJ11193.1| hypothetical protein SELMODRAFT_271933 [Selaginella moellendorffii]
Length = 477
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + VLPEV +R+V FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGSGFRVLHLVRPFLSVLPEVQTADRKVPFREKVMYTVVSLFIFLVCSQLPLYGIHSANG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS+II+VD ++REDRAL GAQK
Sbjct: 61 SDPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LITI EAVAYV+SGMYG V
Sbjct: 121 LLGVLITIGEAVAYVLSGMYGDV 143
>gi|186479015|ref|NP_174225.2| SecY protein transport family protein [Arabidopsis thaliana]
gi|20260296|gb|AAM13046.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis
thaliana]
gi|332192950|gb|AEE31071.1| SecY protein transport family protein [Arabidopsis thaliana]
Length = 475
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + LPEV + +R++ FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
ADPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS+II+VD ++REDRAL GAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LI I EAVAYV+SGMYGPV
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGPV 143
>gi|21593089|gb|AAM65038.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis
thaliana]
Length = 475
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + LPEV + +R++ FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
ADPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS+II+VD ++REDRAL GAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LI I EAVAYV+SGMYGPV
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGPV 143
>gi|302803155|ref|XP_002983331.1| hypothetical protein SELMODRAFT_180018 [Selaginella moellendorffii]
gi|300149016|gb|EFJ15673.1| hypothetical protein SELMODRAFT_180018 [Selaginella moellendorffii]
Length = 477
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
M G R L LV+P + VLPEV +R+V FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MGSGFRVLHLVRPFLSVLPEVQTADRKVPFREKVMYTVVSLFIFLVCSQLPLYGIHSANG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
+DPFYWMRVILASNRGT+MELGI+PIVTSG+VMQLLAGS+II+VD ++REDRAL GAQK
Sbjct: 61 SDPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALVNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LITI EAVAYV+SGMYG V
Sbjct: 121 LLGVLITIGEAVAYVLSGMYGDV 143
>gi|226528621|ref|NP_001146689.1| hypothetical protein LOC100280289 [Zea mays]
gi|219888321|gb|ACL54535.1| unknown [Zea mays]
Length = 475
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 119/143 (83%)
Query: 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129
MA G R L LV+P + LPEV + +R++ FREKV++T+++L +FLVC Q+PL+GI G
Sbjct: 1 MAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSATG 60
Query: 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189
ADPFYWMRVILASNRGT+MELGI+PIVTSGMVMQLL GS+II+VD S+REDRAL GAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQK 120
Query: 190 LLALLITIXEAVAYVISGMYGPV 212
LL +LI I EAVAYV+SGMYG V
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGSV 143
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.329 0.142 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,518,984,410
Number of extensions: 51429590
Number of successful extensions: 126431
Number of sequences better than 10.0: 651
Number of HSP's gapped: 127040
Number of HSP's successfully gapped: 653
Length of query: 212
Length of database: 5,058,227,080
Length adjustment: 133
Effective length of query: 79
Effective length of database: 3,092,788,724
Effective search space: 244330309196
Effective search space used: 244330309196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 78 (34.7 bits)