BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_2433_orf2
         (142 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|309359325|emb|CAP33000.2| hypothetical protein CBG_14498 [Cae...    37     1.2  
gi|268579157|ref|XP_002644561.1| Hypothetical protein CBG14498 [...    37     1.3  

>gi|309359325|emb|CAP33000.2| hypothetical protein CBG_14498 [Caenorhabditis briggsae AF16]
          Length = 431

 Score = 36.6 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 61  LAHRTKTIQPVLSSRFARSLRKSVITSWKCLSNGATLPHTTFKCHLDSNTWGSVV 115
           L+  +KTI   L S F+   +KSVI   KC+S   +LP TT  C +D N +G  V
Sbjct: 86  LSEVSKTIM-YLCSPFSMKRQKSVIEHQKCISGVLSLPATT-GCQMDDNDYGKQV 138


>gi|268579157|ref|XP_002644561.1| Hypothetical protein CBG14498 [Caenorhabditis briggsae]
          Length = 449

 Score = 36.6 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 61  LAHRTKTIQPVLSSRFARSLRKSVITSWKCLSNGATLPHTTFKCHLDSNTWGSVV 115
           L+  +KTI   L S F+   +KSVI   KC+S   +LP TT  C +D N +G  V
Sbjct: 86  LSEVSKTIM-YLCSPFSMKRQKSVIEHQKCISGVLSLPATT-GCQMDDNDYGKQV 138


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.327    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,189,178,106
Number of extensions: 39961027
Number of successful extensions: 102951
Number of sequences better than 10.0: 2
Number of HSP's gapped: 103429
Number of HSP's successfully gapped: 2
Length of query: 142
Length of database: 5,058,227,080
Length adjustment: 106
Effective length of query: 36
Effective length of database: 3,491,787,488
Effective search space: 125704349568
Effective search space used: 125704349568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 76 (33.9 bits)