BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_2219_orf2
         (162 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189424122|ref|YP_001951299.1| periplasmic nitrate reductase, ...    37     1.0  

>gi|189424122|ref|YP_001951299.1| periplasmic nitrate reductase, large subunit [Geobacter lovleyi SZ]
 gi|189420381|gb|ACD94779.1| periplasmic nitrate reductase, large subunit [Geobacter lovleyi SZ]
          Length = 770

 Score = 37.0 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 80  KCLYTQCTSQIRSLSLTSPHRG---YRAAFVVASAMKMLLWKHQDSNVTSPSGAWIPGS- 135
           KCL+ QCT+  +S+   S +R     R AF+V S +       + ++V  PS +W+    
Sbjct: 459 KCLWIQCTNPFQSIPNLSRYRKAAQARKAFIVVSDIYPTR-STEVADVILPSASWVEKEG 517

Query: 136 VFVVTQRRVPVWNKI 150
           VF  T+RR   W K+
Sbjct: 518 VFGNTERRTQHWFKM 532


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.326    0.133    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,276,455,061
Number of extensions: 40191315
Number of successful extensions: 102501
Number of sequences better than 10.0: 1
Number of HSP's gapped: 103022
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 5,058,227,080
Length adjustment: 123
Effective length of query: 39
Effective length of database: 3,240,566,044
Effective search space: 126382075716
Effective search space used: 126382075716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 76 (33.9 bits)