BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_1648_orf2
         (113 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|340052501|emb|CCC46781.1| conserved hypothetical protein [Try...    34     8.8  

>gi|340052501|emb|CCC46781.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 669

 Score = 33.9 bits (76), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 25  PVASSRSSRLRIPLFGFVQGDTKWSSCTVLDTSSLSGVCHFVGVNIFFPCLI--PHAVIA 82
           P  +   +  R+P  G V G   W+ C      S+ G      +  F P ++  P+A+ +
Sbjct: 114 PCGTDVDANCRVPFSGLVHGGASWTDCGATRGGSMYG-----DMEAFLPPIVGHPNAMSS 168

Query: 83  FETARRSCTNSVRCKPASFWCVAPN 107
           F  A  S   S+   P    C AP 
Sbjct: 169 FGCAEFSDFGSMYLTPMENMCCAPG 193


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.324    0.135    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,149,156,795
Number of extensions: 39990078
Number of successful extensions: 104858
Number of sequences better than 10.0: 1
Number of HSP's gapped: 105329
Number of HSP's successfully gapped: 1
Length of query: 113
Length of database: 5,058,227,080
Length adjustment: 81
Effective length of query: 32
Effective length of database: 3,861,230,788
Effective search space: 123559385216
Effective search space used: 123559385216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)