BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_0662_orf2
         (113 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|167535605|ref|XP_001749476.1| hypothetical protein [Monosiga ...    38     0.40 
gi|312198093|ref|YP_004018154.1| hypothetical protein FraEuI1c_4...    33     9.9  

>gi|167535605|ref|XP_001749476.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772104|gb|EDQ85761.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1194

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 7/60 (11%)

Query: 34  MHQLSSHVRPPQWQVLCLTTNYGSILKNFRGPLQGP---SSPAAHGNMDSEAEWTAVPPD 90
           +HQ SS  +PP    LC+  NYG ++   R PL+ P     PA   ++D  A W +V PD
Sbjct: 417 LHQRSSRSKPPS---LCINVNYG-LMNWTRSPLRSPFVHHVPALQWSVDDVANWISVLPD 472


>gi|312198093|ref|YP_004018154.1| hypothetical protein FraEuI1c_4285 [Frankia sp. EuI1c]
 gi|311229429|gb|ADP82284.1| hypothetical protein FraEuI1c_4285 [Frankia sp. EuI1c]
          Length = 536

 Score = 33.5 bits (75), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 1   PLLSCLHAGARICSNPDEGARLGYANVHHTAAEMHQLSSHVRPPQWQVLCLTTNYGSILK 60
           P+L   +AG  +  N D G  +G+ ++  T A   Q++  V P +   + L  NYG    
Sbjct: 388 PVLPASNAGPIVAMNADVGETIGWPDLVRTVA---QVARQVPPGRGTPVILARNYGEAGA 444

Query: 61  NFR-GPLQGPSSPAAHGNMDSEAEWTAVPPDR 91
             R GP  G   PAA+   ++  +W   PPDR
Sbjct: 445 VDRYGPALG--LPAAYSGHNAFGDWGP-PPDR 473


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.314    0.130    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,296,029,185
Number of extensions: 50371107
Number of successful extensions: 77065
Number of sequences better than 10.0: 7
Number of HSP's gapped: 77665
Number of HSP's successfully gapped: 7
Length of query: 113
Length of database: 5,058,227,080
Length adjustment: 81
Effective length of query: 32
Effective length of database: 3,861,230,788
Effective search space: 123559385216
Effective search space used: 123559385216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)