bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-35_CDS_annotation_glimmer3.pl_2_1
Length=96
Score E
Sequences producing significant alignments: (Bits) Value
pmot:X970_08700 FAD-binding dehydrogenase 34.7 1.7
pmon:X969_09040 FAD-binding dehydrogenase 34.7 1.7
ppuh:B479_11140 FAD-binding dehydrogenase 34.7 1.7
ppt:PPS_2143 putative FAD-binding dehydrogenase 34.3 2.3
nno:NONO_c27320 acyl-CoA dehydrogenase 34.3 2.3
pgr:PGTG_09428 hypothetical protein 33.9 2.9
hni:W911_06045 hypothetical protein 33.5 4.6
pti:PHATRDRAFT_40623 hypothetical protein 33.1 6.8
asl:Aeqsu_1199 putative dehydrogenase 33.1 7.1
crb:CARUB_v10000554mg hypothetical protein 32.7 7.7
pyo:PY02637 splicing factor 32.7 8.1
bpy:Bphyt_6929 fimbrial protein 32.3 8.2
hoh:Hoch_5308 phosphate-selective porin O and P 32.7 8.2
> pmot:X970_08700 FAD-binding dehydrogenase
Length=570
Score = 34.7 bits (78), Expect = 1.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (7%)
Query 8 QSDWYNAAQSWNQMLSSTGMTPLGLQETLSDIGKNAGNAIDNAIGAG-----RKAGEKLR 62
+S + A + Q+ + G+ P+GL+ T+SD +A N D A G G RK G+
Sbjct 418 RSGYLKRAATLEQLAQACGIDPVGLRATVSDFNNHARNGQDPAFGRGSTPFNRKQGDPQH 477
Query 63 GNMNKAMDNIKNG 75
N + I++G
Sbjct 478 KGPNPCVAPIEHG 490
> pmon:X969_09040 FAD-binding dehydrogenase
Length=570
Score = 34.7 bits (78), Expect = 1.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (7%)
Query 8 QSDWYNAAQSWNQMLSSTGMTPLGLQETLSDIGKNAGNAIDNAIGAG-----RKAGEKLR 62
+S + A + Q+ + G+ P+GL+ T+SD +A N D A G G RK G+
Sbjct 418 RSGYLKRAATLEQLAQACGIDPVGLRATVSDFNNHARNGQDPAFGRGSTPFNRKQGDPQH 477
Query 63 GNMNKAMDNIKNG 75
N + I++G
Sbjct 478 KGPNPCVAPIEHG 490
> ppuh:B479_11140 FAD-binding dehydrogenase
Length=570
Score = 34.7 bits (78), Expect = 1.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (7%)
Query 8 QSDWYNAAQSWNQMLSSTGMTPLGLQETLSDIGKNAGNAIDNAIGAG-----RKAGEKLR 62
+S + A + Q+ + G+ P+GL+ T+SD +A N D A G G RK G+
Sbjct 418 RSGYLKRAATLEQLAQACGIDPVGLRATVSDFNNHARNGQDPAFGRGSTPFNRKQGDPQH 477
Query 63 GNMNKAMDNIKNG 75
N + I++G
Sbjct 478 KGPNPCVAPIEHG 490
> ppt:PPS_2143 putative FAD-binding dehydrogenase
Length=545
Score = 34.3 bits (77), Expect = 2.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (7%)
Query 8 QSDWYNAAQSWNQMLSSTGMTPLGLQETLSDIGKNAGNAIDNAIGAG-----RKAGEKLR 62
+S + A + Q+ + G+ P+GL+ T+SD +A N D A G G RK G+
Sbjct 393 RSGYLKRAATLEQLAQACGIDPVGLRATVSDFNNHARNGQDPAFGRGSTPFNRKQGDPQH 452
Query 63 GNMNKAMDNIKNG 75
N + I++G
Sbjct 453 KGPNPCVAPIEHG 465
> nno:NONO_c27320 acyl-CoA dehydrogenase
Length=340
Score = 34.3 bits (77), Expect = 2.3, Method: Composition-based stats.
Identities = 16/56 (29%), Positives = 32/56 (57%), Gaps = 0/56 (0%)
Query 38 DIGKNAGNAIDNAIGAGRKAGEKLRGNMNKAMDNIKNGHGIDNITGNRNRAGGGAG 93
+I + + +D+ G ++GE+ G +++ + N +G G+ N+TG+ G GAG
Sbjct 6 EIDRELADLLDSVFGEYAESGERAPGELDRELWNRLDGLGLVNLTGDEAHGGSGAG 61
> pgr:PGTG_09428 hypothetical protein
Length=224
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/74 (34%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query 22 LSSTGMTPLGLQETLSDIGKNAGNAIDNAIGAGRKAGEKLRGNMNKAMDNIKNGHGIDNI 81
+++T P + ++I K G+ +GA AGE +RGN+N A+D G G D I
Sbjct 21 VAATAAEPTTQPKKFANIQKTVGSKARAFLGAFHTAGEHIRGNINAALD----GAG-DAI 75
Query 82 TGNRNRAGGGAGRR 95
G + G AGR+
Sbjct 76 AGRKT--GTVAGRK 87
> hni:W911_06045 hypothetical protein
Length=273
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 42 NAGNAIDNAIGAGRKAGEKLRGNMN 66
NAGNAID AI AG KA E LR ++
Sbjct 104 NAGNAIDRAIEAGEKAHESLRRQID 128
> pti:PHATRDRAFT_40623 hypothetical protein
Length=631
Score = 33.1 bits (74), Expect = 6.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (2%)
Query 24 STGMTPLGLQETLSDIG-KNAGNAIDNAIGAGRKAGEKLRGNMNKAMDNIKNGHGIDNIT 82
S G PLG + I + + + N EKLRGN N+ DN +G+GI T
Sbjct 2 SLGQLPLGKESYSVTIAVEKINDKLLNLFAGYLTRAEKLRGNKNETQDNFSDGNGISYNT 61
Query 83 GNR 85
R
Sbjct 62 AER 64
> asl:Aeqsu_1199 putative dehydrogenase
Length=713
Score = 33.1 bits (74), Expect = 7.1, Method: Composition-based stats.
Identities = 24/64 (38%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query 20 QMLSSTGMTPLGLQETLSDIGKNAGNAIDNAIGAGRKAGEKLR--GNMNKAMDNIKNGHG 77
Q+L + G G+ D+ KN ID AI +G G LR N+N A+DN +GHG
Sbjct 188 QLLKANGCRVFGI-----DLSKNL---IDLAITSGAD-GAMLRNDSNLNTAIDNFTDGHG 238
Query 78 IDNI 81
D++
Sbjct 239 FDSV 242
> crb:CARUB_v10000554mg hypothetical protein
Length=583
Score = 32.7 bits (73), Expect = 7.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 0/48 (0%)
Query 48 DNAIGAGRKAGEKLRGNMNKAMDNIKNGHGIDNITGNRNRAGGGAGRR 95
D A +K ++L N+++A+ ++KN +D+ N+N + GG GR+
Sbjct 43 DQTSSAMQKRFQRLGRNVSEAIASLKNSLSLDSARDNQNASAGGGGRK 90
> pyo:PY02637 splicing factor
Length=583
Score = 32.7 bits (73), Expect = 8.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (2%)
Query 32 LQETLSDIGKNAGNAIDNAIGAGRKAGEKLRGNMNKAMDNIKNG-HGIDNI 81
L+E D+ + N DN GRK +L G +NK I NG +DNI
Sbjct 382 LEENPVDMSQEENNISDNKYIKGRKQKNQLHGKLNKNDSEISNGEETLDNI 432
> bpy:Bphyt_6929 fimbrial protein
Length=185
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (48%), Gaps = 4/69 (6%)
Query 28 TPLGLQETLSDIGKNAGNAIDNAIGAGRKAGEKLR----GNMNKAMDNIKNGHGIDNITG 83
TP L TL+ + A +A G A +L+ G ++KA+ + +NG +D +G
Sbjct 50 TPADLAVTLAPVSITALSATGEVAGTSSPADLQLKLTGCGTVSKAIASFENGPNVDQSSG 109
Query 84 NRNRAGGGA 92
N GG A
Sbjct 110 NLVNVGGTA 118
> hoh:Hoch_5308 phosphate-selective porin O and P
Length=402
Score = 32.7 bits (73), Expect = 8.2, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 29 PLGLQETLSDIGKN-AGNAIDNAIG-AGRKAGEKLRGNMNKAMDNIKNGHGIDNITGNRN 86
P QE +SD G G AI N G AGR G +K+ D ++ G N TG+R
Sbjct 150 PFSRQEIVSDFGSEYIGRAITNRFGGAGRDLGIIAHNGYDKSPDGLEWAFGAFNSTGDRA 209
Query 87 RAG 89
R G
Sbjct 210 RQG 212
Lambda K H a alpha
0.310 0.129 0.384 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 125463047190