bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_3

Length=73
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  alt:ambt_14960  hypothetical protein                                33.5    2.9
  zro:ZYRO0F12804g  hypothetical protein                              32.7    5.0
  csu:CSUB_C0037  hypothetical protein                                32.0    8.4


> alt:ambt_14960  hypothetical protein
Length=568

 Score = 33.5 bits (75),  Expect = 2.9, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query  19  KLIATFVIGVITTLFVHSCTLSLSVAKNNTNSTQKTEQT----STSSVDSTRINI  69
           K  +T  + V T+LF+ +C+ +   A +  N+T+K  QT    ST  V+ +R++I
Sbjct  6   KHYSTLAVAVATSLFMSACSKAPEEAVSQANTTEKASQTVLPDSTLLVNESRLSI  60


> zro:ZYRO0F12804g  hypothetical protein
Length=399

 Score = 32.7 bits (73),  Expect = 5.0, Method: Compositional matrix adjust.
 Identities = 15/41 (37%), Positives = 26/41 (63%), Gaps = 0/41 (0%)

Query  2   SKKTIMKITATQWIEIVKLIATFVIGVITTLFVHSCTLSLS  42
           +K+T+  I   QW+EI+KL+   V+ + +T  +H+  LS S
Sbjct  54  NKRTLRDIPLDQWVEILKLVKCEVLSIKSTKQMHAFLLSES  94


> csu:CSUB_C0037  hypothetical protein
Length=486

 Score = 32.0 bits (71),  Expect = 8.4, Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (4%)

Query  17  IVKLIATFVIGVI-TTLFVHSCTLSLSVAKNNTNSTQKTEQTSTSSVDSTRININSK  72
           ++ +I+  V+GV+ TT F+H  T  ++  K     T  T QT+ S    TR+N+ +K
Sbjct  7   LILVISLLVVGVLATTTFLHPSTHQITSVKPGETDTHTTVQTAMSP-SMTRLNLIAK  62



Lambda      K        H        a         alpha
   0.313    0.121    0.317    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125472237464