bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-26_CDS_annotation_glimmer3.pl_2_3
Length=120
Score E
Sequences producing significant alignments: (Bits) Value
gau:GAU_1571 rph; ribonuclease PH 39.3 0.060
eao:BD94_2365 putative TonB-dependent receptor 36.2 1.0
tru:101063073 uncharacterized LOC101063073 34.7 3.6
paeh:H70357_00890 GCN5 family acetyltransferase 33.5 6.6
mgi:Mflv_4799 aldehyde dehydrogenase 33.5 9.1
> gau:GAU_1571 rph; ribonuclease PH
Length=247
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (48%), Gaps = 5/103 (5%)
Query 21 RAYRDRGGIGDRSASLIELIG-TERVSRRDYGYEGTFYVTEDGETYDNEYMNTHNPIRTG 79
R+ R+R +G R+ + LIG + R DY + G F + D + + T TG
Sbjct 80 RSSRERQQVGGRTQEIQRLIGRSVRAMLDDYRF-GEFTIKVDCDVLQADG-GTRTAAITG 137
Query 80 --VNFYEVSNWRYNEGKEMYEPVIRRIVMIKIRFVEYQLSLDL 120
V + NW + G+ + PV RR+ I + V+ ++ LDL
Sbjct 138 ACVAVQDAFNWMVSTGRIIASPVKRRVAAISVGMVDGEVRLDL 180
> eao:BD94_2365 putative TonB-dependent receptor
Length=790
Score = 36.2 bits (82), Expect = 1.0, Method: Composition-based stats.
Identities = 15/54 (28%), Positives = 28/54 (52%), Gaps = 0/54 (0%)
Query 49 DYGYEGTFYVTEDGETYDNEYMNTHNPIRTGVNFYEVSNWRYNEGKEMYEPVIR 102
D+ Y ++ +D + Y+N+ N ++ I T +VS+W G + Y P I+
Sbjct 648 DFSYNENYFFGQDQQLYENKIYNLNSTISTSFTLQKVSDWTLEIGHQYYSPSIQ 701
> tru:101063073 uncharacterized LOC101063073
Length=489
Score = 34.7 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (47%), Gaps = 11/79 (14%)
Query 6 CNQKNRKHTEEEQNYRA-----YRDRGGIGDRSASLIELIGTERVSRRDYGYEGTFYVTE 60
C+ K K+ +A +RD+ G+GDR+A ++ L E+ S +D GY T
Sbjct 15 CSSKTAKNKSNSATLQAALSSIHRDQSGMGDRNAHMV-LCDGEKDSEKDSGYSET----- 68
Query 61 DGETYDNEYMNTHNPIRTG 79
E+ + + H IRT
Sbjct 69 GSESVHTDLNDEHKGIRTA 87
> paeh:H70357_00890 GCN5 family acetyltransferase
Length=174
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/75 (31%), Positives = 35/75 (47%), Gaps = 3/75 (4%)
Query 1 MGSGICNQKNRKHTEEEQNYRAYRDRGGIGDRSASLI---ELIGTERVSRRDYGYEGTFY 57
+G GI + RK E +A GG+G A ++ I +ER RR+ G E + Y
Sbjct 100 IGYGILRSERRKGLATELLRQALLKAGGLGITKALVVCDDSNIASERTIRRNGGVEDSSY 159
Query 58 VTEDGETYDNEYMNT 72
+ EDG ++ T
Sbjct 160 IEEDGNVIRRFWIET 174
> mgi:Mflv_4799 aldehyde dehydrogenase
Length=513
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 21/40 (53%), Positives = 23/40 (58%), Gaps = 4/40 (10%)
Query 21 RAYRDR-GGIGDRSASLIELIGTERVSRRDYGYEGTFYVT 59
RAYRD G + A E+IG ERV D G EG FYVT
Sbjct 349 RAYRDMVGALQQAQAEGGEVIGGERV---DVGDEGAFYVT 385
Lambda K H a alpha
0.317 0.137 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 128140709664