bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-20_CDS_annotation_glimmer3.pl_2_5
Length=90
Score E
Sequences producing significant alignments: (Bits) Value
gga:416585 IL4R; interleukin 4 receptor 36.6 0.39
fch:102059925 IL4R; interleukin 4 receptor 33.5 4.3
del:DelCs14_3775 fomryl-CoA transferase (EC:2.8.3.16) 33.5 4.3
dac:Daci_2966 L-carnitine dehydratase/bile acid-inducible prot... 33.5 4.3
phd:102344646 succinate--hydroxymethylglutarate CoA-transferas... 33.5 4.3
fpg:101913747 IL4R; interleukin 4 receptor 33.1 5.2
pvu:PHAVU_005G126400g hypothetical protein 32.0 6.3
psl:Psta_2112 hypothetical protein 32.7 7.2
vpd:VAPA_1c05340 putative acyl-CoA transferase 32.7 7.2
vap:Vapar_0456 L-carnitine dehydratase/bile acid-inducible pro... 32.7 7.2
lsp:Bsph_4729 tRNA-dihydrouridine synthase 2 32.7
clv:102092650 uncharacterized LOC102092650 32.3 9.1
vpe:Varpa_0475 L-carnitine dehydratase/bile acid-inducible pro... 32.3 9.3
lsp:Bsph_0767 hypothetical protein 32.3 9.3
bcm:Bcenmc03_4805 L-carnitine dehydratase/bile acid-inducible ... 32.3 9.8
bch:Bcen2424_5464 L-carnitine dehydratase/bile acid-inducible ... 32.3 9.8
bcn:Bcen_5397 L-carnitine dehydratase/bile acid-inducible prot... 32.3 9.8
> gga:416585 IL4R; interleukin 4 receptor
Length=1112
Score = 36.6 bits (83), Expect = 0.39, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 31/65 (48%), Gaps = 10/65 (15%)
Query 30 VLVIQYDHFDDFARWKDWVSHVSFPYAYTRAIDDVVTVEVPVE----------PFFRFTT 79
V++I+ ++ D A W DW V F Y Y +D++ + VP+ +F FT
Sbjct 315 VVIIRCNYTDYPAYWSDWSDGVEFHYDYQVTPEDILHMAVPISCILIMAVAVICYFCFTK 374
Query 80 APKKW 84
K+W
Sbjct 375 MKKEW 379
> fch:102059925 IL4R; interleukin 4 receptor
Length=866
Score = 33.5 bits (75), Expect = 4.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query 33 IQYDHFDDFARWKDWVSHVSFPYAYTRAIDDVVTVEVPVE----------PFFRFTTAPK 82
++ ++ D A W +W V F Y Y +DV+ + VPV +F FT K
Sbjct 202 VRCNYTDYPAYWSEWSDKVEFHYDYQVTTEDVLQMAVPVSCILIMAVSVTCYFCFTKVKK 261
Query 83 KW 84
+W
Sbjct 262 EW 263
> del:DelCs14_3775 fomryl-CoA transferase (EC:2.8.3.16)
Length=415
Score = 33.5 bits (75), Expect = 4.3, Method: Composition-based stats.
Identities = 22/57 (39%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query 12 LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRAIDDVV 65
LIA +D V K G M L + YD D +VSH F PY + A+D+VV
Sbjct 99 LIATADVVCENFKPGTMRKLGLDYDSLKDRFERLIYVSHKGFLPGPYEHRTALDEVV 155
> dac:Daci_2966 L-carnitine dehydratase/bile acid-inducible protein
F
Length=415
Score = 33.5 bits (75), Expect = 4.3, Method: Composition-based stats.
Identities = 22/57 (39%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query 12 LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRAIDDVV 65
LIA +D V K G M L + YD D +VSH F PY + A+D+VV
Sbjct 99 LIATADVVCENFKPGTMRKLGLDYDSLKDRFERLIYVSHKGFLPGPYEHRTALDEVV 155
> phd:102344646 succinate--hydroxymethylglutarate CoA-transferase-like
Length=415
Score = 33.5 bits (75), Expect = 4.3, Method: Composition-based stats.
Identities = 22/57 (39%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query 12 LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRAIDDVV 65
LIA +D V K G M L + YD D +VSH F PY + A+D+VV
Sbjct 99 LIATADVVCENFKPGTMRKLGLDYDSLKDRFERLIYVSHKGFLPGPYEHRTALDEVV 155
> fpg:101913747 IL4R; interleukin 4 receptor
Length=872
Score = 33.1 bits (74), Expect = 5.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query 33 IQYDHFDDFARWKDWVSHVSFPYAYTRAIDDVVTVEVPVE----------PFFRFTTAPK 82
++ ++ D A W +W V F Y Y +DV+ + VPV +F FT K
Sbjct 208 VRCNYTDYPAYWSEWSDKVEFHYDYQVTAEDVLQMAVPVSCILIMAVSVTCYFCFTKVKK 267
Query 83 KW 84
+W
Sbjct 268 EW 269
> pvu:PHAVU_005G126400g hypothetical protein
Length=108
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 11/75 (15%)
Query 7 RGLEALIAWSDSV---TWKTKAGKMPVL--------VIQYDHFDDFARWKDWVSHVSFPY 55
+G+E L++ D+V W + VL ++ ++ +DFA ++ +HV F
Sbjct 26 KGMEKLVSEIDAVKAFEWGRDIESLDVLRQGFTHAFLMTFNKKEDFAAFQSHPNHVEFST 85
Query 56 AYTRAIDDVVTVEVP 70
++ AI+++V ++ P
Sbjct 86 TFSAAIENIVLLDFP 100
> psl:Psta_2112 hypothetical protein
Length=523
Score = 32.7 bits (73), Expect = 7.2, Method: Composition-based stats.
Identities = 15/43 (35%), Positives = 22/43 (51%), Gaps = 0/43 (0%)
Query 40 DFARWKDWVSHVSFPYAYTRAIDDVVTVEVPVEPFFRFTTAPK 82
D ARW+DW S + + A + V +P+ +FR APK
Sbjct 318 DLARWEDWESAETLFKLFESANETNSWVRMPIVNYFRLCPAPK 360
> vpd:VAPA_1c05340 putative acyl-CoA transferase
Length=396
Score = 32.7 bits (73), Expect = 7.2, Method: Composition-based stats.
Identities = 23/64 (36%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query 8 GLEA---LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRAI 61
G+EA L+A +D V+ K G M L + YD +VSH F PY + A+
Sbjct 78 GVEAALRLVATADIVSENFKPGTMKKLGLDYDSLKQLNPRLIYVSHKGFLPGPYDHRTAL 137
Query 62 DDVV 65
D+VV
Sbjct 138 DEVV 141
> vap:Vapar_0456 L-carnitine dehydratase/bile acid-inducible protein
F
Length=396
Score = 32.7 bits (73), Expect = 7.2, Method: Composition-based stats.
Identities = 23/64 (36%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query 8 GLEA---LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRAI 61
G+EA L+A +D V+ K G M L + YD +VSH F PY + A+
Sbjct 78 GVEAALRLVATADIVSENFKPGTMKKLGLDYDSLKQLNPRLIYVSHKGFLPGPYDHRTAL 137
Query 62 DDVV 65
D+VV
Sbjct 138 DEVV 141
> lsp:Bsph_4729 tRNA-dihydrouridine synthase 2
Length=325
Score = 32.7 bits (73), Expect = 7.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 14 AWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHV 51
A + + KAG +PV V F D A W++W++H+
Sbjct 125 ALASEIIQAAKAGGLPVSVKTRLGFTDVAEWREWLTHI 162
> clv:102092650 uncharacterized LOC102092650
Length=1093
Score = 32.3 bits (72), Expect = 9.1, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (45%), Gaps = 10/65 (15%)
Query 30 VLVIQYDHFDDFARWKDWVSHVSFPYAYTRAIDDVVTVEVP----------VEPFFRFTT 79
V ++ ++ D W +W V F Y Y A +DV+ + VP V +F FT
Sbjct 222 VASVRCNYTDYPGYWSEWSEVVEFHYDYQVAAEDVLQMAVPGACILVMALSVICYFCFTK 281
Query 80 APKKW 84
K+W
Sbjct 282 VKKEW 286
> vpe:Varpa_0475 L-carnitine dehydratase/bile acid-inducible protein
f
Length=399
Score = 32.3 bits (72), Expect = 9.3, Method: Composition-based stats.
Identities = 24/64 (38%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query 8 GLEA---LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRAI 61
G+EA LIA +D V+ K G M L + YD +VSH F PY + A+
Sbjct 81 GVEAALRLIATADIVSENFKPGTMKKLGLDYDTLAKLNPRLIYVSHKGFLPGPYDHRTAL 140
Query 62 DDVV 65
D+VV
Sbjct 141 DEVV 144
> lsp:Bsph_0767 hypothetical protein
Length=335
Score = 32.3 bits (72), Expect = 9.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query 36 DHFDDFARWKDWVSHV-SFPYAYTRAIDDVV 65
D +D RWK+W++H+ FP+ +D V
Sbjct 81 DRQEDLIRWKEWIAHIFPFPFCKVTVTNDAV 111
> bcm:Bcenmc03_4805 L-carnitine dehydratase/bile acid-inducible
protein F
Length=430
Score = 32.3 bits (72), Expect = 9.8, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query 7 RGLEA---LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRA 60
RGLE L+A +D + K+G M L + Y D +VSH F PY + A
Sbjct 80 RGLEIVRRLVATADVFSENFKSGTMDRLGLGYPQLDALNPRLVYVSHKGFLPGPYEHRTA 139
Query 61 IDDVV 65
+D+VV
Sbjct 140 LDEVV 144
> bch:Bcen2424_5464 L-carnitine dehydratase/bile acid-inducible
protein F
Length=430
Score = 32.3 bits (72), Expect = 9.8, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query 7 RGLEA---LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRA 60
RGLE L+A +D + K+G M L + Y D +VSH F PY + A
Sbjct 80 RGLEIVRRLVATADVFSENFKSGTMDRLGLGYPQLDALNPRLVYVSHKGFLPGPYEHRTA 139
Query 61 IDDVV 65
+D+VV
Sbjct 140 LDEVV 144
> bcn:Bcen_5397 L-carnitine dehydratase/bile acid-inducible protein
F
Length=430
Score = 32.3 bits (72), Expect = 9.8, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query 7 RGLEA---LIAWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSF---PYAYTRA 60
RGLE L+A +D + K+G M L + Y D +VSH F PY + A
Sbjct 80 RGLEIVRRLVATADVFSENFKSGTMDRLGLGYPQLDALNPRLVYVSHKGFLPGPYEHRTA 139
Query 61 IDDVV 65
+D+VV
Sbjct 140 LDEVV 144
Lambda K H a alpha
0.323 0.134 0.461 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 128026330890