bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-20_CDS_annotation_glimmer3.pl_2_4

Length=60
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  amj:102570500  tetratricopeptide repeat protein 28-like             33.1    3.5
  asn:102379874  TTC28; tetratricopeptide repeat domain 28            33.1
  swi:Swit_0338  hypothetical protein                                 32.3    5.3
  gxy:GLX_00130  hypothetical protein                                 32.3    5.8


> amj:102570500  tetratricopeptide repeat protein 28-like
Length=2555

 Score = 33.1 bits (74),  Expect = 3.5, Method: Composition-based stats.
 Identities = 17/37 (46%), Positives = 20/37 (54%), Gaps = 0/37 (0%)

Query  17    FSVVDVEHLSAVIDDAKARFGADSKIEVVMQTTEPYA  53
             FS++  E L+   DDAKARF  D K     QT E  A
Sbjct  2133  FSIISTEPLAGYPDDAKARFSPDHKQSKAGQTGEAKA  2169


> asn:102379874  TTC28; tetratricopeptide repeat domain 28
Length=2455

 Score = 33.1 bits (74),  Expect = 3.7, Method: Composition-based stats.
 Identities = 17/37 (46%), Positives = 20/37 (54%), Gaps = 0/37 (0%)

Query  17    FSVVDVEHLSAVIDDAKARFGADSKIEVVMQTTEPYA  53
             FS++  E L+   DDAKARF  D K     QT E  A
Sbjct  2033  FSIISTEPLAGYPDDAKARFSPDHKQSKAGQTGEAKA  2069


> swi:Swit_0338  hypothetical protein
Length=395

 Score = 32.3 bits (72),  Expect = 5.3, Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 0/40 (0%)

Query  15   PYFSVVDVEHLSAVIDDAKARFGADSKIEVVMQTTEPYAP  54
            P+F   D    ++ I+D +AR  AD ++ +V+   +P  P
Sbjct  287  PWFQTTDYRFHASSINDKQARRDADGRVRIVLSPRDPGVP  326


> gxy:GLX_00130  hypothetical protein
Length=912

 Score = 32.3 bits (72),  Expect = 5.8, Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 22/38 (58%), Gaps = 0/38 (0%)

Query  13   GRPYFSVVDVEHLSAVIDDAKARFGADSKIEVVMQTTE  50
            GR +F  +D+EH    +D+A+A FG  +  E V Q  E
Sbjct  480  GRLWFLALDIEHNRRDMDNAQADFGVQTAQEAVRQQLE  517



Lambda      K        H        a         alpha
   0.315    0.134    0.375    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125604996786