FEATURES             Location/Qualifiers
     gene            complement(110..1174)
                     /locus_tag="Alpa_01"
     CDS             complement(110..1174)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MIGAAIGAAGALAGGIVNQIGNNKQGNKNRKHQLEMQRIQNEWASSESQKSRDFAKSMFDATNEWNSAKNQRARLEEAGLNPYLMMNGGSAGTASSTSANTVSGASGSGGSPYQFTPTNMIGDVASYAAAMKSMSDARKTNTESDLLDQYGAATYESRIKKTMADTYFTQRQADVAIAQRANLLLRNDAQEVLNMYLPEEKRIQLQMNGAQYWNMIREGVISEEQAKNLIASRLEIEARTQGQHISNKIARSTADAVIDATCTAKENEAAFNRGYSQFSNDVGFRTGKMDRWSQDPVKARWDRGINNAGKFIDGLSNIVGAVTKFGSFRREGRSVIEQFDDNQGYSSTRQRYRR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 19 and 20 "
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1171..1581)
                     /locus_tag="Alpa_02"
     CDS             complement(1171..1581)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="VTSEMLAQGVLPEPNPVGDFLFDHNADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLVPRSSNYTRNYNDDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQAYAASLSASVVNPTQSTQSAAQSSTE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:INSD:WP_004291033.1"
                     /inference="similar to AA sequence:INSD:WP_008775337.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1683..3521)
                     /locus_tag="Alpa_03"
     CDS             complement(1683..3521)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MAGLFSYGDIKNKPRRSGFDLGNKNAFTAKVGELLPVYWKFCLPGDKFKISQEWFTRTQPVDTSAFTRIREYYEWFFVPLHLMYRNSNEAIMSMENQPNYAASGTQSITFNRKLPWVDLLTLNNAVENVKASTYHDNMFGFSRALGFAKLYNYLGVGQVDPSKTLANLRISAFPFYAYQKIYNDYYRNSQWEVNKPWTYNCDFWNGEDTTPVASSKDLFDTNPNDSIFELRYANWNKDLYMGAMPNAQFGDVAFVPVDSSGKLPVSLPSIEVGGVAPIYNTGAGGVQPDAQIGLRGAITGAPDNGQTVTAYGADKTDAARPYFYAVPDGSVAHLKTNAKTIQVPYEFSSKFDVLQLRAAECLQKWKEIAQANGQNYASQVKAHFGVSPNPMTSHRCQRVCGFDGSIDISAVENTNLSSDEAIIRGKGIGGYRVNKPETFKTTEHGVLMCIYHAVPLLDYAPTGPDLQFMTTVDGDSWPVPELDSVGFEELPSYSLLNTSDVQPIKEPRPFGYVPRYISWKTSVDVVRGAFIDTLKSWTAPIGEDYMKIYFDNNNVPGGAHFGFYTWFKVNPSVVNPIFGVVADGSWNTDQLLVNCDFDVRVARNLSYDGLPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3527..3736)
                     /locus_tag="Alpa_04"
     CDS             complement(3527..3736)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MAYDIDIETFPTIHNDIVDGIPESYVHYFKQYLYEIEDRRISQNTDVSVRPLDALSETGIIQLKFNFID"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3736..4131)
                     /locus_tag="Alpa_05"
     CDS             complement(3736..4131)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MYRPKYFSFTEMILTASTAQENNLPDWDDINRLLELCRWILDPVREMYGKPIVVTSGFRTPFLNRLVGGVSTSQHMQGLAADLRCDDPKALFDLIAESDLPFDQLIYYQKKKFVHVSYSPTYRHEVIVKDN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase.M15A"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase"
                     /inference="similar to AA sequence:INSD:WP_010803336.1"
                     /inference="similar to AA sequence:INSD:WP_028728351.1"
                     /db_xref="InterPro:IPR013230"
                     /db_xref="InterPro:IPR009045"
                     /db_xref="eggNOG:bactNOG163302"
                     /db_xref="eggNOG:bproNOG20824"
                     /db_xref="eggNOG:NOG79001"
                     /db_xref="eggNOG:proNOG95037"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4134..4286)
                     /locus_tag="Alpa_06"
     CDS             complement(4134..4286)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MEKQFYLVLLHYGSEVSSKVVISLDRLDSFLSRGYTVEFVQPIRVLSDEL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4293..5903)
                     /locus_tag="Alpa_07"
     CDS             complement(4293..5903)
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MISPVVKPYCSCLHPVIIKNRYTGDPIYVECGECEVCLSNKAIQKELRCNIQLASSRCCFFVTLTYATVHIPVARFYKLNDSYHLCCVPRDHVYTYVTSQGYDREMSFCDEEFDCPTNLSDKAVTDLLAKTHLDRTVYPDGRSVVKYPNMVDLLPYLNYRDVQLFHKRINQQIKKYTNEKIHTYTVGEYGPKTFRPHFHILFFFDSERLAQIFGQLVDKAWRFGDSDTQRVWSSASSYVAGYLNSYLCLPEFYRYNRKIAPFGRFSQHFAERSFIEAFKPEENTEIFDKFVDGIYLSLGDKPTLCRPKRSLINRLYPILDRSSVSDVDSNVRTALFVSKIPQVLARYGFLDEVTLFEQAKRTFFVIKKYLQVDHSLDNAPEALRFIYNACRLSLYLNFSELEGCSAVYRLFLAYRNLCDHWITVPSNHIAFYGQLRRAFRTIYAFYSYMDSKHLHDQLLKVRSWSQNNYLSTQVDFRYFYPLTDGELMCNSYREVLALSPFCRAAYAEVAADNRQRIKHKYLNDLNCVLIAECDRH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 ctggacggaa agaggggaca gaacgaagag tgaagcagga gggccaaacg gctaaaggcc 
       61 gacttatcac aagccagccg atagtaatta accaacaaaa gtaaacaaac tacctacgat 
      121 agcgttgacg agtagaagaa taaccctgat tatcgtcaaa ttgttctatc acagaacgac 
      181 cttcacgacg gaaagaacca aacttagtaa cagcaccaac aatattagag agaccgtcta 
      241 taaacttgcc agcattatta atacctctat cccaacgagc tttaacggga tcctgagacc 
      301 aacggtccat cttacctgta cgaaaaccaa catcattaga aaattgggaa taaccacggt 
      361 taaaagcagc ttcattttcc ttagctgtac aagtagcgtc gatcacagca tcagcagtag 
      421 aacgagcgat tttattagaa atatgctgtc cctgtgtacg tgcttcaatt tccaagcgag 
      481 aagcgatcaa attctttgcc tgttcttcgg aaataacacc ctcacgaatc atattccaat 
      541 attgtgcacc attcatttgc aactgtatgc gcttttcctc ggggagatac atattcagaa 
      601 cttcctgtgc atcattgcga agaagaagat tagctctctg tgcgatcgca acatccgctt 
      661 gtctctgagt aaaataagta tctgccatag tctttttaat ccgagattca taagtagctg 
      721 caccgtactg atcaagtaga tcagactcag tattagtctt acgagcatca gacatagatt 
      781 tcatagcagc agcataagaa gcaacatcac caatcatatt agtaggcgta aactgataag 
      841 gcgaaccacc tgaaccagaa gcacctgaaa cagtattagc agaagtagaa gaagctgtac 
      901 cagcagaacc accgttcatc atcaaataag gatttaaacc agcttcctct aaacgtgcac 
      961 gttgattttt agcagagttc cattcgttcg tagcgtcaaa cattgattta gcaaaatcac 
     1021 gtgatttctg ggattcagaa cttgcccatt cgttttgaat ccgctgcatt tcaagctgat 
     1081 gttttctatt cttatttccc tgcttattat tgccaatttg attaacgata ccgccagcta 
     1141 aagcaccagc agcaccgatt gcagcaccaa tcattcagta gacgattggg cagcagattg 
     1201 agtagactga gtaggattaa caacagaagc agacaaagaa gcagcataag cctgcaaatc 
     1261 agattctaaa gattgaccct cagaaagaag atgatcaagc caagaagcca tttcagtagc 
     1321 cgactgtata ttgcgatcct tacaataatc aagcaagaaa tcatcattgt agttacgtgt 
     1381 ataattcgaa gagcgaggaa caaggctatt catataacgg cgtaactgag tctgattcat 
     1441 attgtcaata gctttttgac caaacaaaat gccatagtct gaacagaaag taacagaacc 
     1501 atctgcatta tgatcaaata gaaaatcacc aacgggatta ggttcaggca aaacaccctg 
     1561 agcaagcatt tcagaggtca caacacaccg acaactctgc gagtgatcgg aaatatcaga 
     1621 gttaagcgaa tatttcgcaa aacctcttaa gggagtaact ttttcagaca taacgataaa 
     1681 tattaataag gtaaaccatc gtaagacaaa ttgcgagcta cacggacatc aaaatcacaa 
     1741 ttgacaagca attgatcagt attccatgaa ccatcagcga caacaccgaa aataggattg 
     1801 acaacagacg gattcacttt aaaccacgta tagaagccaa aatgcgcacc accgggaaca 
     1861 ttgttattat cgaaatagat tttcatataa tcctcaccaa tcggagcagt ccaagatttt 
     1921 agagtatcaa taaaagcacc tcgcacaaca tcaacagacg ttttccaact gatataccga 
     1981 ggaacataac cgaaaggcct aggctcttta atcggctgaa catcagaagt attcaacaaa 
     2041 gaataagacg gaagttcttc aaaaccgaca gaatctaact caggaacagg ccatgaatca 
     2101 ccatcaacag tagtcataaa ctgcaaatca ggaccagtcg gggcataatc caaaagaggc 
     2161 acagcatgat aaatacacat cagaacacca tgctcagtag ttttaaatgt ttcgggttta 
     2221 tttacacgat aaccgccaat acctttaccg cggataatag cctcgtcaga agaaaggttt 
     2281 gtattttcaa cagcggaaat atcaatcgaa ccatcaaaac cacaaacacg ctgacagcgg 
     2341 tgagatgtca taggattagg agaaacacca aaatgtgcct tcacctgaga agcataattt 
     2401 tgaccatttg cctgtgcgat ctctttccat ttttgaagac attcagcagc acgaagctga 
     2461 agaacatcaa atttcgatga aaactcgtaa ggaacttgaa tagtcttagc attggttttc 
     2521 agatgggcaa cagagccatc aggaacagca taaaaataag gacgtgcggc gtcagtttta 
     2581 tcagcaccgt aagcagtaac ggtctgtcca ttatccggcg cacctgtaat agcaccacgt 
     2641 aaaccgatct gagcatcagg ttgaacaccg ccagcacctg tattataaat aggagcgaca 
     2701 ccgccaactt cgatagacgg aagactgaca ggaagtttac cggaagaatc aacaggaaca 
     2761 aaagctacat cgccaaactg agcattaggc atagcaccca tataaagatc tttattccag 
     2821 ttggcgtaac gaagttcaaa aattgaatca ttcggattgg tatcaaaaag atcttttgaa 
     2881 gaagctactg gtgtagtatc ctcaccgttc caaaagtcac agttataagt ccaaggttta 
     2941 ttcacttccc attgagagtt ccgatagtaa tcattataaa ttttctgata ggcatagaac 
     3001 gggaaagcag atatacgaag attagcaagc gtcttagacg gatcaacttg accaacacca 
     3061 agataattat aaagttttgc aaagccaaga gcacgactaa aaccaaacat attgtcatga 
     3121 tatgtagaag ccttaacatt ctcaacagca ttattcaaag tcagaagatc aacccaagga 
     3181 agtttgcgat tgaaagtaat actctgagta cctgatgcag catagttagg ttgattttcc 
     3241 attgacataa tagcttcgtt tgaatttcta tacatcaagt gaagaggtac aaagaaccat 
     3301 tcataatact cacgaatacg ggtaaatgca gaagtgtcaa caggttgtgt acgtgtaaac 
     3361 cattcttgcg aaatcttaaa cttatcacct gggaggcaaa atttccaata aacaggcaaa 
     3421 agctcaccga ccttagcggt aaaagcattt ttattaccta aatcaaatcc tgaacggcga 
     3481 ggcttatttt taatatcgcc gtaagaaaaa agaccagcca taaaaattaa tctataaaat 
     3541 taaacttaag ttgaattatc cccgtttccg aaagagcgtc aagaggtcta acagaaacat 
     3601 cagtattttg cgaaatacgc ctatcctcaa tttcatataa gtactgttta aaataatgaa 
     3661 cataactttc aggtatccca tctactatat cattatgaat agtagggaaa gtctcaatat 
     3721 caatatcgta agccatcaat tatcctttac aataacttca tgccgataag taggagaata 
     3781 ggacacatga acgaacttct tcttctgata atagatcaat tgatcaaaag gaagatcaga 
     3841 ttcagcgata agatcaaaga gtgctttcgg gtcatcacaa cgaagatcag cagccaaacc 
     3901 ttgcatgtgt tgcgaagtag aaacaccacc aactaaacgg ttaaggaacg gagtacggaa 
     3961 acctgaagta acaacaatag gtttaccata catctcacga accggatcaa gtatccaacg 
     4021 gcaaagctca agcagacgat taatatcatc ccaatcagga agattgtttt cctgagcagt 
     4081 agacgccgta agaatcatct cagtgaaaga aaaatactta ggtctataca tagctacaat 
     4141 tcatcagata aaacacgaat aggctgaaca aattcaacag tgtaaccacg agacaaaaag 
     4201 gaatcaagac gatctaaaga aataactacc ttagacgaaa cctcactacc atagtgaaga 
     4261 agaaccaaat aaaattgttt ttccataatg aatcaatgtc tatcacattc ggcgatcaat 
     4321 acgcaattca aatcattgag atatttgtgc tttatacgct gtcgattatc cgcagcaacc 
     4381 tctgcatagg cggctcgaca aaacggagat aaagccagca cttcacgata agaattacac 
     4441 atcaactcgc cgtcagtaag tggataaaaa tatctaaaat caacctgagt agacaggtaa 
     4501 ttgttttgag accacgaccg aacctttaga agctgatcat gaagatgttt agaatccata 
     4561 tagctataaa aggcataaat cgttcggaac gccctacgta attgaccata aaaagcaata 
     4621 tgattggacg gaacagttat ccaatgatca caaagattac gataggccaa aaacaagcga 
     4681 tacacagcag aacatccctc taattcgcta aaattgagat acaaagataa acgacaagca 
     4741 ttgtagatga aacgaagcgc ttcgggggca ttgtccaaac tgtgatcaac ttgcaaatat 
     4801 tttttaataa caaagaaagt acgcttagcc tgctcaaaca aagtcacttc atcaaggaat 
     4861 ccataccttg cgaggacttg aggtatttta gagacaaaga gcgcagttct aacgttagaa 
     4921 tcaacatccg atacagaaga gcggtcaagg atggggtata atcgattgat aagcgaccgc 
     4981 ttaggccggc aaagtgtagg cttatcaccg agagagaggt aaattccatc aacgaactta 
     5041 tcgaatattt ccgtgttttc ttcgggctta aaagcttcga taaacgagcg ttccgcaaaa 
     5101 tgctgtgaaa aacgtccgaa tggcgcgatt tttctattat atctataaaa ttcgggaaga 
     5161 cagagatagc tattaagata tcccgcaacg tacgatgaag cggaagacca tacacgttgc 
     5221 gtatctgaat caccaaagcg ccatgcctta tccacaagct gtccaaatat ctgggcgagc 
     5281 cgttccgagt caaagaaaaa taagatatga aaatgcggac ggaatgtttt aggaccgtat 
     5341 tcaccgacag tgtacgtatg aatcttttca tttgtatatt tttttatttg ttgattaatt 
     5401 cttttatgaa acagttgaac atctcggtaa ttaaggtagg gtaacaaatc gaccatatta 
     5461 ggatacttaa caacagaacg accatcagga taaacagtcc tatcaagatg tgttttagcc 
     5521 aagagatcgg taacagcttt atcactgaga ttagttggac aatcaaattc ttcatcacaa 
     5581 aaagacattt cacgatcata tccttgagat gtaacatacg tgtaaacatg atcacgaggt 
     5641 acacaacaaa gatggtaaga atcattaagt ttataaaacc tagcaacagg tatatgtact 
     5701 gtggcataag tcaaagttac aaagaaacaa caacgagaag atgcaagctg aatattacaa 
     5761 cgaagttcct tttgaatagc tttattagaa agacacacct cacattcacc acattcaaca 
     5821 tatatgggat cacctgtata tctgttttta ataataacag gatgcaaaca agagcaatat 
     5881 ggtttaacta ctggactaat catatacaaa gataaacgat aaaaattgaa atgtgcaagc 
     5941 aaacgttttt ttttaactat aaattaacat caagaacata cctatatata tagtgatgtc 
     6001 acttttgctt atcctgaaca aggaaggttt gaatcggaaa taacagttaa tccgatttgc 
     6061 tttcgcacaa aagtgaagag aactacgtac caaatctaaa tattagttaa taaaatggag 
     6121 gatattcgcg aaaatattta caaaaaaaac ggggatcgcc actttatgat gcctccggcg 
     6181 gcacgctacg gcccgtcgga cgccgacggt ttttt 
//
