bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-9_CDS_annotation_glimmer3.pl_2_7 Length=157 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01609 110 7e-26 > 469590.BSCG_01609 Length=580 Score = 110 bits (276), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/162 (41%), Positives = 94/162 (58%), Gaps = 10/162 (6%) Query 1 LDY--QLTGPDLQLLNTYATDLPQPELDNLGLEALPYFTFVNDAVATQPNNVTVKSIIGY 58 LDY L P +N+ TD PE D +G+E++P + +N Q + SI+GY Sbjct 424 LDYTTDLVNPAFTKINS--TDFAIPEFDRVGMESVPLVSLMN---PLQSSYNVGSSILGY 478 Query 59 VPRYIAYKTDIDCVDGAFLTSLTSWVTPLTIDEIVTKISLGS--GTGPFT-PNYGLFKVS 115 PRYI+YKTD+D GAF T+L SWV ++ +++ P T NY FKV+ Sbjct 479 APRYISYKTDVDSSVGAFKTTLKSWVMSYDNQSVINQLNYQDDPNNSPGTLVNYTNFKVN 538 Query 116 PYVLDSIFVSQCDSTVDTDQFLVESFFDVKLVQNLDYNGMPY 157 P +D +F +++DTDQFL SFFDVK+V+NLD +G+PY Sbjct 539 PNCVDPLFAVAASNSIDTDQFLCSSFFDVKVVRNLDTDGLPY 580 Lambda K H a alpha 0.319 0.139 0.416 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127011550360