bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-6_CDS_annotation_glimmer3.pl_2_1

Length=59
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_0935                                              36.6    0.20


> 585502.HMPREF0645_0935
Length=519

 Score = 36.6 bits (83),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 22/60 (37%), Positives = 29/60 (48%), Gaps = 4/60 (7%)

Query  3    RSFTGLPQLGQQFLLVDPNAVNQVFSV----TEYTDKIFGYVKFNATARLPISRVAIPRL  58
            R +T  PQL      +DP  +N VF V    TE TD +FG   FN      +S   +PR+
Sbjct  460  RRWTTFPQLEIADFKIDPGCLNSVFPVEFNGTESTDCVFGGCNFNIVKVSDMSVDGMPRV  519



Lambda      K        H        a         alpha
   0.326    0.140    0.411    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125187668910