bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-37_CDS_annotation_glimmer3.pl_2_1 Length=238 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01608 95.5 9e-20 > 469590.BSCG_01608 Length=497 Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/205 (35%), Positives = 99/205 (48%), Gaps = 15/205 (7%) Query 1 MQLFFKRLNQNI-RSVTNEKIYYYVVGEYGPTTFRPHFHILLFHDSKELRQSIRQFVSKS 59 +QLF KRL + + +EK+ Y+ VGEYGP FRPH+H+LLF S E Q + +SK+ Sbjct 125 LQLFLKRLRYYVTKQKPSEKVRYFAVGEYGPVHFRPHYHLLLFLQSDEALQICSENISKA 184 Query 60 WRFGDTDTQPVWSSASCYVAGYVNSTACLPDFYKNFSHIKPFGRFSMHFAESAFNEVFKP 119 W FG D Q S YVA YVNS+ +P +K S + PF S + F Sbjct 185 WTFGRVDCQVSKGQCSNYVASYVNSSCTIPKVFKA-SSVCPFSVHSQKLGQG-----FLD 238 Query 120 QEDEEIFSLFYDGRM---LELNGKPTLVRPKRSHINRLYPRLNKSKHASVDDDIRVATAL 176 + E+I+SL + + + LNGK RS + YPR S + A Sbjct 239 CQREKIYSLTPENFIRSSIVLNGKYKEFDVWRSCYSFFYPRCKGFVTKSSRE-----RAY 293 Query 177 SNIPHVLAKFGFIDEVTDFEMSKRI 201 S + A+ F D T F ++K I Sbjct 294 SYSIYDTARLLFPDAKTTFSLAKEI 318 Lambda K H a alpha 0.326 0.140 0.429 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 319753276220