bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_2

Length=53
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  2850.Phatr40219                                                     32.7    3.9


> 2850.Phatr40219
Length=942

 Score = 32.7 bits (73),  Expect = 3.9, Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (61%), Gaps = 0/28 (0%)

Query  15   GEKLRGNMNKAMDNIKNGHGIDNITGNR  42
             EKLRGN N+  DN  +G+GI   T  R
Sbjct  104  AEKLRGNKNETQDNFSDGNGISYNTAER  131



Lambda      K        H        a         alpha
   0.314    0.135    0.396    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127597504770