bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-34_CDS_annotation_glimmer3.pl_2_1

Length=117
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                 49.3    5e-05


> 483216.BACEGG_02721
Length=578

 Score = 49.3 bits (116),  Expect = 5e-05, Method: Composition-based stats.
 Identities = 26/69 (38%), Positives = 38/69 (55%), Gaps = 0/69 (0%)

Query  15  RSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTMLTPIMDNMFLDTYY  74
           R+ FD S     +  AG+++P MV EVLPGD+F I+     R+Q + T     +     +
Sbjct  16  RNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQPVNTAAFARIREYYDF  75

Query  75  FFVPNRLVW  83
           FFVP  L+W
Sbjct  76  FFVPYDLLW  84



Lambda      K        H        a         alpha
   0.324    0.138    0.463    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127480741410