bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_6

Length=176
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02722                                                 46.2    4e-04


> 483216.BACEGG_02722
Length=155

 Score = 46.2 bits (108),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 12/124 (10%)

Query  16   RKVDPSISAV---GFNPAVREKEIAVEIDPVSKFCIETIGEGPDKYYRYRSDISMLLHA-  71
            R+V+P +        N AV      VE  P+ +F  + I     K  R  SDI ML +  
Sbjct  6    RRVEPYVDKFQPNNVNSAVLSGSEFVEPSPLHEFMFQEIECDGKKSIRITSDIYMLFNQQ  65

Query  72   ---KDTANKIGIEGLRYLSESRRTKTSAIQSQLDQMDDQLLLDTVKSRHLQSPSEILAWS  128
               K T +++ +E    LS S   K S ++ +   M D+ L   VKSR +Q+PSE++AWS
Sbjct  66   RLDKLTRSQL-VEYFDNLSVSE-PKMSDLRKK---MTDEQLCSFVKSRFIQTPSELMAWS  120

Query  129  ESLI  132
            + L+
Sbjct  121  QYLM  124



Lambda      K        H        a         alpha
   0.312    0.128    0.349    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 146223805940