bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-29_CDS_annotation_glimmer3.pl_2_1

Length=218
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              49.3    2e-04


> 585502.HMPREF0645_1835
Length=553

 Score = 49.3 bits (116),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 46/150 (31%), Positives = 69/150 (46%), Gaps = 28/150 (19%)

Query  1    VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANS-----------TPQGNPSGQSRTT  49
            V  PD+R  R  YLGG    + +S++ QTSGT+A               +G  SG+ R  
Sbjct  331  VEIPDSRDGRVNYLGGFDSDMQVSDVTQTSGTTATEYKPEAGYLGRVAGKGTGSGRGR--  388

Query  50   DVHSDFKKSFVEHGFIIGVMVA----RYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQA  105
             +  D K    EHG ++ +       +YD T    L+    +  R DY+ P F N+G Q 
Sbjct  389  -IVFDAK----EHGVLMCIYSLVPQIQYDCTR---LDPMVDKLDRFDYFTPEFENLGMQP  440

Query  106  VLNKEIYAQGNGTD--DEVFGYQEAWADYR  133
             LN    +    TD  + V GYQ  +++Y+
Sbjct  441  -LNSSYISSFCTTDPKNPVLGYQPRYSEYK  469



Lambda      K        H        a         alpha
   0.316    0.133    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 262019206680