bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-27_CDS_annotation_glimmer3.pl_2_4 Length=250 Score E Sequences producing significant alignments: (Bits) Value 425265.XP_001730259.1 42.4 0.082 > 425265.XP_001730259.1 Length=736 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (46%), Gaps = 6/107 (6%) Query 69 RRFSALCRRRMPMF---ETWHR-EQQHFCSEPGCGEKILYSPEFDRFGVMTLKESGKEDL 124 RRF ALC R +PM W + Q H C+EPG + + S ++R + ++ + +L Sbjct 466 RRFHALCERGIPMHYRPAVWSQFVQAHMCAEPGIYQHLYESSTYERQIALDVRRTMPANL 525 Query 125 YAFIQSHKDSVDLHKIMDRFNAGDASALQKVQGMFGDFSEMPQTYAG 171 Y F LH+++ + DA + QGM + + TY Sbjct 526 Y-FGGCGPGVPKLHRLLSAYARYDAGS-GYCQGMNNLAAVLLLTYTN 570 Lambda K H a alpha 0.320 0.132 0.411 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 352205873940