bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-23_CDS_annotation_glimmer3.pl_2_2 Length=102 Score E Sequences producing significant alignments: (Bits) Value 749516.HMPREF9519_00232 34.7 2.1 > 749516.HMPREF9519_00232 Length=440 Score = 34.7 bits (78), Expect = 2.1, Method: Composition-based stats. Identities = 26/77 (34%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query 16 VETFEGETIEEKVNRIVNNGEPIKDGAPIIYTEKKDGVLPEYDIRTDRWDIA-IEAMDKV 74 V TF IE RI NG+PI D IIY EK ++ E D T+ I E + + Sbjct 70 VGTFTSPYIESFNERIAINGQPISDEQLIIYVEKYQPIIKELDQITEVAGITEFETLTGM 129 Query 75 NMDRMAKRENKPDVTEV 91 +D + V EV Sbjct 130 ALDYFVNEQVDIAVVEV 146 Lambda K H a alpha 0.310 0.132 0.375 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 125749474460