bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-22_CDS_annotation_glimmer3.pl_2_9

Length=263
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              63.5    8e-09


> 888743.HMPREF9141_0985
Length=531

 Score = 63.5 bits (153),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 37/249 (15%)

Query  48   ERCETPMFEGGVSQEIVFQEVISNS----ASQEEP-LGTLAGRGVTTGRQKGGHIRIKVT  102
             R     F GG    +V  EV++ S     + E P LG L G+GV  G      I   V 
Sbjct  287  SRAGDARFIGGFDNPVVISEVVNQSEFDRGADESPCLGDLGGKGV--GSLNSSSIDFDVK  344

Query  103  EPCYIMCICSITPRIDYGQGNTWDTYLETM--DDWHKPALDGIGYQDSLNGER-AWWTDH  159
            E   IMCI S+ P+ +Y  G  +D +   +  +D+ +P    +GYQ  +  +  + + D+
Sbjct  345  EHGIIMCIYSVVPQTEY-NGTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLISTYLDN  403

Query  160  IASNGGSLTK-TAAGKTVAWIN--------------YMTNVNRTFGNFAPEMPESFMVLN  204
               +G    K  AAG  ++ I               Y T+ +  FG F   +  S+    
Sbjct  404  PVPDGPEKQKRLAAGYPLSSIEANNRLLGWQVRYNEYKTSRDLVFGEFESGLSLSYWCSP  463

Query  205  RNYSMNNNGQIEDLTT----------YIDPVKFNYIFADTNLDAMNFWVQTKFDIKVRRL  254
            R Y    +G+  D             Y++P   N IF  + + A +F V + FD+K  R 
Sbjct  464  R-YDFGFDGKAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDVKAVRP  522

Query  255  ISAKQIPNL  263
            +S   +  L
Sbjct  523  MSVSGLAGL  531



Lambda      K        H        a         alpha
   0.318    0.135    0.419    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 387405859680