bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_7

Length=346
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              72.8    2e-11


> 585502.HMPREF0645_1835
Length=553

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 62/214 (29%), Positives = 98/214 (46%), Gaps = 14/214 (7%)

Query  58   NNGNTAPLVNGQYIQTMSQDDANFFDAWLGTDLSNIEAA-TINQLRQAFAVQHYYEALAR  116
            +N N AP     Y+++   D +NF     G D  + E   +++ LR AFAV        R
Sbjct  263  DNINIAPR---DYVKS---DGSNFTRVNFGVDTDSSEGDFSVSSLRAAFAVDKLLSVTMR  316

Query  117  GGSRYREQVRALFGVSISDKTVQIPEYLGGGRYHVNMNQIVQTSGQESN-YGTPIGETG-  174
             G  +++Q+RA +GV I D       YLGG    + ++ + QTSG  +  Y    G  G 
Sbjct  317  AGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDMQVSDVTQTSGTTATEYKPEAGYLGR  376

Query  175  -AMSVTPINESSFTKSFEEHGFVIGVMCVRHDHSYQ-QGLERFWSRSDRLDYYFPQFANL  232
             A   T           +EHG ++ +  +     Y    L+    + DR DY+ P+F NL
Sbjct  377  VAGKGTGSGRGRIVFDAKEHGVLMCIYSLVPQIQYDCTRLDPMVDKLDRFDYFTPEFENL  436

Query  233  GEQPVKKKEIMLTGKSTDEE--TFGYQEAWADYR  264
            G QP+    I  +  +TD +    GYQ  +++Y+
Sbjct  437  GMQPLNSSYIS-SFCTTDPKNPVLGYQPRYSEYK  469



Lambda      K        H        a         alpha
   0.316    0.132    0.392    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 624184756540