bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-17_CDS_annotation_glimmer3.pl_2_8 Length=88 Score E Sequences producing significant alignments: (Bits) Value 30608.ENSMICP00000009477 35.8 0.76 > 30608.ENSMICP00000009477 Length=1351 Score = 35.8 bits (81), Expect = 0.76, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 36/71 (51%), Gaps = 3/71 (4%) Query 18 TQEEKEYMIVIGKHLATTEKFPTREAAEEAINSINWNLVTAMIYACKEADEYEKKL--KR 75 +Q E+E GK L++ + FPT E A A+N + + + A +Y C + K + K+ Sbjct 920 SQPEQEVGTTDGKALSSQDTFPTEECALSAVNLTD-DQIAAGLYVCTNNESTLKSIMKKK 978 Query 76 SAKKIDNNTKK 86 K N TKK Sbjct 979 DGNKDSNGTKK 989 Lambda K H a alpha 0.311 0.127 0.349 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127494496500