bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-16_CDS_annotation_glimmer3.pl_2_4 Length=91 Score E Sequences producing significant alignments: (Bits) Value 554155.XP_002850310.1 37.0 0.39 > 554155.XP_002850310.1 Length=1443 Score = 37.0 bits (84), Expect = 0.39, Method: Composition-based stats. Identities = 23/80 (29%), Positives = 42/80 (53%), Gaps = 4/80 (5%) Query 2 EIQENLIPLRRIEVTAIINALKIIKIMQKFIISV---KEKQTGRDVIPPYIVNSLEGLGH 58 + +EN +PLR++ + ++ LK I I+++ E G D++PPY N L+ Sbjct 392 QAKENELPLRKLTIGECVDYLKSISKNDPVILAIDALDELYAGNDLVPPYWTN-LQRFLE 450 Query 59 YSERVSQLGLIVIVDSIREE 78 + + Q G + IV S R++ Sbjct 451 ALDTLEQTGNVKIVVSSRDD 470 Lambda K H a alpha 0.319 0.140 0.368 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 126155698800