bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-15_CDS_annotation_glimmer3.pl_2_5 Length=589 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01609 729 0.0 > 469590.BSCG_01609 Length=580 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/609 (61%), Positives = 447/609 (73%), Gaps = 49/609 (8%) Query 1 MANIMSLKSLRNKTSRNGFDLSSKRNFTAKAGELLPVKTWEVLPGDTFKIDLKSFTRTQP 60 MANIMSLKSLRNKTSRNGFDLSSKRNFTAK GELLPVK WEVLPGD + IDLKSFTRTQP Sbjct 1 MANIMSLKSLRNKTSRNGFDLSSKRNFTAKPGELLPVKCWEVLPGDKWSIDLKSFTRTQP 60 Query 61 LNTAAFARMREYYDFYFVPYDLLWNKANTSLTQMYDNPQHALDSSPLNVVKLDGSMPFTD 120 LNTAAFARMREYYDFYFVPY+LLWNKANT LTQMYDNPQHA P L G MP Sbjct 61 LNTAAFARMREYYDFYFVPYNLLWNKANTVLTQMYDNPQHATSYIPSANQALAGVMPNVT 120 Query 121 LSSISRYLNSLASNSTAVTN-KANYFGYNRALCSAKLMECLGYGNLYYYAESTSNTFAKR 179 I+ YLN +A + T + + NYFGY+R+L +AKL+E LGYGN Y YA S +NT+ K Sbjct 121 CKGIADYLNLVAPDVTTTNSYEKNYFGYSRSLGTAKLLEYLGYGNFYTYATSKNNTWTKS 180 Query 180 PLHYNLNVSLFNLLAYQKIYADYYRDSQWERVSPSCFNVDYMPYSTGSS----GMMLSFN 235 PL NL ++++ +LAYQKIYAD+ RDSQWE+VSPSCFNVDY+ + S+ M+ Sbjct 181 PLSSNLQLNIYGVLAYQKIYADHIRDSQWEKVSPSCFNVDYLSGTVDSAMTIDSMITGQG 240 Query 236 YSDFYENYSMFDLRYCNWQKDLFHGVVPNQQYGDVASISMSVPVVAGSSAALINSRITSS 295 ++ FY +MFDLRYCNWQKDLFHGV+P QQYGD A++++++ V + + Sbjct 241 FAPFY---NMFDLRYCNWQKDLFHGVLPRQQYGDTAAVNVNLSNVLSAQYMV-------- 289 Query 296 NSTTTLRFPTDPAIPDATPLLTHP---------------SFSILALRQAEFLQKWKEITQ 340 PD P+ P +F++LALRQAEFLQKWKEITQ Sbjct 290 ------------QTPDGDPVGGSPFSSTGVNLQTVNGSGTFTVLALRQAEFLQKWKEITQ 337 Query 341 SGNKDYKEQVEKHWNVSPGDGFSEMCTYLGGISSSLDINEVVNQNITGSNAADIAGKGTG 400 SGNKDYK+Q+EKHWNVS G+ +SEM YLGG ++SLDINEVVN NITGSNAADIAGKG Sbjct 338 SGNKDYKDQIEKHWNVSVGEAYSEMSLYLGGTTASLDINEVVNNNITGSNAADIAGKGVV 397 Query 401 VSNGVINFNSQGRYGVVMCIYHCLPLIDYTTDFVSPSVTRVNAADFAIPEFDRVGMQTVP 460 V NG I+F++ RYG++MCIYH LPL+DYTTD V+P+ T++N+ DFAIPEFDRVGM++VP Sbjct 398 VGNGRISFDAGERYGLIMCIYHSLPLLDYTTDLVNPAFTKINSTDFAIPEFDRVGMESVP 457 Query 461 LSYVSNGPLSVLPLSIPNEIGYAPRYIDYKTDIDTSIGAFKTSLKNWVISYDNQSLANQF 520 L + N PL + +GYAPRYI YKTD+D+S+GAFKT+LK+WV+SYDNQS+ NQ Sbjct 458 LVSLMN-PLQSSYNVGSSILGYAPRYISYKTDVDSSVGAFKTTLKSWVMSYDNQSVINQL 516 Query 521 GYSVETPESPVPNPANSSWNYTLFKVNPNSLNPLFAVEADSSIDTDQFLCSTFFDVKVVR 580 Y + SP + NYT FKVNPN ++PLFAV A +SIDTDQFLCS+FFDVKVVR Sbjct 517 NYQDDPNNSP-----GTLVNYTNFKVNPNCVDPLFAVAASNSIDTDQFLCSSFFDVKVVR 571 Query 581 NLDTDGLPY 589 NLDTDGLPY Sbjct 572 NLDTDGLPY 580 Lambda K H a alpha 0.317 0.132 0.397 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1312306575360