bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-14_CDS_annotation_glimmer3.pl_2_8 Length=99 Score E Sequences producing significant alignments: (Bits) Value 313628.LNTAR_22045 33.1 6.3 > 313628.LNTAR_22045 Length=812 Score = 33.1 bits (74), Expect = 6.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 38/71 (54%), Gaps = 1/71 (1%) Query 7 KEGETIETKVRRITEEKTPITDSAPIVYTNRTDGVIAGYN-IRTDRFEIALSAMDKVNKA 65 K+ +T V+ I +++ P+ P+ Y N D + + T+R A++ +++ K Sbjct 245 KQNHQNDTLVKVIAQQELPVKQKIPVTYDNELDAYALDIDHLNTNRSPGAVNNREELIKV 304 Query 66 KIATRNAKNKV 76 +I RN+++KV Sbjct 305 RIQNRNSEDKV 315 Lambda K H a alpha 0.304 0.122 0.312 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127132898750