bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-37_CDS_annotation_glimmer3.pl_2_2 Length=147 Score E Sequences producing significant alignments: (Bits) Value gi|528217197|gb|EPY20329.1| ATP-binding protein cassette, subfam... 37.4 2.7 gi|528215564|gb|EPY19478.1| ATP-binding protein cassette, subfam... 37.0 3.6 gi|663673190|ref|WP_030457042.1| glycosyl transferase 36.2 6.4 >gi|528217197|gb|EPY20329.1| ATP-binding protein cassette, subfamily D (ALD), member 2 [Strigomonas culicis] gi|528238034|gb|EPY29334.1| ATP-binding protein cassette, subfamily D (ALD), member 2 [Strigomonas culicis] Length=714 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 29/53 (55%), Gaps = 0/53 (0%) Query 35 VGSVAFTGQLRYAVRSIHSFYDYCAKRSLRDQLLKVEKWSNDSYVRENLSIYY 87 +G VA GQ+R + SI F CA ++ + L K D Y RENL++Y+ Sbjct 122 LGKVAVQGQMRPLLLSIAGFIASCAPAAVLNSSLDYWKEMLDLYFRENLTVYF 174 >gi|528215564|gb|EPY19478.1| ATP-binding protein cassette, subfamily D (ALD), member 2 [Strigomonas culicis] Length=691 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/56 (36%), Positives = 29/56 (52%), Gaps = 0/56 (0%) Query 32 TAPVGSVAFTGQLRYAVRSIHSFYDYCAKRSLRDQLLKVEKWSNDSYVRENLSIYY 87 +G VA GQ+R + SI F CA ++ + L K D Y RENL++Y+ Sbjct 96 VGKLGKVAVQGQMRPLLLSIAGFIASCAPAAVLNSSLDYWKEMLDLYFRENLTVYF 151 >gi|663673190|ref|WP_030457042.1| glycosyl transferase, partial [Herbidospora cretacea] Length=363 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 27/97 (28%), Positives = 40/97 (41%), Gaps = 3/97 (3%) Query 46 YAVRSIHSFYDYCAKRSLRDQLLKVEKWSNDSYVRENLSIYYFYPLTDVDIMKSSYSEIV 105 YA S+ Y + D LL+ E + Y +L + F P VD++ YS Sbjct 159 YAAGSVMIPYGAPVQERCDDDLLRAEGYEPGGY---HLVVARFEPENHVDLIVEGYSRSA 215 Query 106 FYSPVLRASYADYAADNRERIKHKALNDKNSLLIAAV 142 P++ A YA + RI A D+ L+ AV Sbjct 216 ARLPLVVVGSAPYAEEYVRRIDDLAAKDERVKLVGAV 252 Lambda K H a alpha 0.320 0.133 0.392 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 436430036016