bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-2_CDS_annotation_glimmer3.pl_2_6
Length=176
Score E
Sequences producing significant alignments: (Bits) Value
gi|490418710|ref|WP_004291033.1| hypothetical protein 39.7 0.38
gi|496050830|ref|WP_008775337.1| hypothetical protein 37.0 3.0
gi|547226429|ref|WP_021963492.1| putative uncharacterized protein 37.0 3.4
>gi|490418710|ref|WP_004291033.1| hypothetical protein [Bacteroides eggerthii]
gi|217986637|gb|EEC52971.1| hypothetical protein BACEGG_02722 [Bacteroides eggerthii DSM
20697]
Length=155
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 4/135 (3%)
Query 16 RKVDPSISAV---GFNPAVREKEIAVEIDPVSKFCIETIGEGPDKYYRYRSDISMLLHAK 72
R+V+P + N AV VE P+ +F + I K R SDI ML + +
Sbjct 6 RRVEPYVDKFQPNNVNSAVLSGSEFVEPSPLHEFMFQEIECDGKKSIRITSDIYMLFN-Q 64
Query 73 DTANKIGIEGLRYLSESRRTKTSAIqsqldqmddqllldTVKSRHLQSPSEILAWSESLI 132
+K+ L ++ + +M D+ L VKSR +Q+PSE++AWS+ L+
Sbjct 65 QRLDKLTRSQLVEYFDNLSVSEPKMSDLRKKMTDEQLCSFVKSRFIQTPSELMAWSQYLM 124
Query 133 QVAHELETRVGAEIR 147
+ EI+
Sbjct 125 SSQDAMIAAAAVEIQ 139
>gi|496050830|ref|WP_008775337.1| hypothetical protein [Bacteroides sp. 2_2_4]
gi|229448894|gb|EEO54685.1| hypothetical protein BSCG_01610 [Bacteroides sp. 2_2_4]
Length=154
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/126 (29%), Positives = 57/126 (45%), Gaps = 6/126 (5%)
Query 16 RKVDPSISAVGFNPAVREKEIAV----EIDPVSKFCIETIGEGPDKYYRYRSDISMLLHA 71
R+++P ++ V N V KE+ E PV +F + + D R SDI ML +
Sbjct 5 RRIEPYVTPVREN-IVGSKEMQCSEFREESPVDQFLFQEVSVDGDTSIRLSSDIYMLFNQ 63
Query 72 KDTANKIGIEGLRYLSESRRTKTSAIqsqldqmddqllldTVKSRHLQSPSEILAWSESL 131
+ L Y + T+ ++ D+ L+ VKSR +QS SE++AWS L
Sbjct 64 QRLDKLSQTSLLEYFNNISVTEP-RFNELRSKLGDEQLISFVKSRFIQSKSELMAWSNYL 122
Query 132 IQVAHE 137
+ E
Sbjct 123 MNSTDE 128
>gi|547226429|ref|WP_021963492.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
gi|524103381|emb|CCY83992.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=152
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/115 (30%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query 22 ISAVGFNPAVR-EKEIAVEIDPVSKFCIE--TIGEGPDK--YYRYRSDISMLLHAKDTAN 76
I+ FN A E+ V+ P+ +F E T G DK Y DI ML + ++ +
Sbjct 8 IARYSFNVASGIERNNFVQPSPIREFMTEKVTYFNGSDKKTAIAYVDDIYMLFN-QNRLD 66
Query 77 KIGIEGLRYLSESRRTKTSAIqsqldqmddqllldTVKSRHLQSPSEILAWSESL 131
+G + ++ + ++ ++ + + D+ L++ KSR++QS SE+LAWSE L
Sbjct 67 SVGRDTIQKWLDGLTPRSDSLAKLRENVTDEQLMEICKSRYIQSSSELLAWSEYL 121
Lambda K H a alpha
0.314 0.132 0.369 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 435911049240