bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-26_CDS_annotation_glimmer3.pl_2_3

Length=120
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|501981496|ref|WP_012683060.1|  ribonuclease PH                     39.3    0.20
gi|609714133|emb|CDN76778.1|  conserved exported hypothetical pro...  36.2    3.4
gi|617637071|ref|XP_007530752.1|  PREDICTED: repetin                  36.2    3.5
gi|639228526|ref|WP_024564112.1|  TonB-dependent receptor             36.2    3.5
gi|657610245|ref|WP_029421384.1|  MlrC domain protein                 35.0    7.0


>gi|501981496|ref|WP_012683060.1| ribonuclease PH [Gemmatimonas aurantiaca]
 gi|226226977|ref|YP_002761083.1| ribonuclease PH [Gemmatimonas aurantiaca T-27]
 gi|226090168|dbj|BAH38613.1| ribonuclease PH [Gemmatimonas aurantiaca T-27]
Length=247

 Score = 39.3 bits (90),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (48%), Gaps = 5/103 (5%)

Query  21   RAYRDRGGIGDRSASLIELIG-TERVSRRDYGYEGTFYVTEDGETYDNEYMNTHNPIRTG  79
            R+ R+R  +G R+  +  LIG + R    DY + G F +  D +    +   T     TG
Sbjct  80   RSSRERQQVGGRTQEIQRLIGRSVRAMLDDYRF-GEFTIKVDCDVLQADG-GTRTAAITG  137

Query  80   --VNFYEVSNWRYNEGKEMYEPVIRRIVMIKIRFVEYQLSLDL  120
              V   +  NW  + G+ +  PV RR+  I +  V+ ++ LDL
Sbjct  138  ACVAVQDAFNWMVSTGRIIASPVKRRVAAISVGMVDGEVRLDL  180


>gi|609714133|emb|CDN76778.1| conserved exported hypothetical protein [Elizabethkingia anophelis]
 gi|609715850|emb|CDN75776.1| conserved exported hypothetical protein [Elizabethkingia anophelis]
Length=790

 Score = 36.2 bits (82),  Expect = 3.4, Method: Composition-based stats.
 Identities = 15/54 (28%), Positives = 28/54 (52%), Gaps = 0/54 (0%)

Query  49   DYGYEGTFYVTEDGETYDNEYMNTHNPIRTGVNFYEVSNWRYNEGKEMYEPVIR  102
            D+ Y   ++  +D + Y+N+  N ++ I T     +VS+W    G + Y P I+
Sbjct  648  DFSYNENYFFGQDQQLYENKIYNLNSTISTSFTLQKVSDWTLEIGHQYYSPSIQ  701


>gi|617637071|ref|XP_007530752.1| PREDICTED: repetin [Erinaceus europaeus]
Length=764

 Score = 36.2 bits (82),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (51%), Gaps = 5/87 (6%)

Query  8    QKNRKHTEEEQNYRAYRDRGGIGDRSASLIEL-IGTERVSRRDYGYEGTFYVTE--DGET  64
            Q+ R H+  EQ +R  + R   G R +  IE   G +R SR  +G+EG     E  D +T
Sbjct  558  QQERSHSHTEQGHRDAQTRQSCGQRQSHQIEKEQGHQRQSR--HGHEGQENPCEVQDRQT  615

Query  65   YDNEYMNTHNPIRTGVNFYEVSNWRYN  91
            +++E+  +H       + +E +N R N
Sbjct  616  HEHEHEQSHQTQNRQTHEHEENNQRQN  642


>gi|639228526|ref|WP_024564112.1| TonB-dependent receptor [Elizabethkingia anophelis]
 gi|675104847|gb|AIL46140.1| putative TonB-dependent receptor [Elizabethkingia anophelis NUHP1]
Length=790

 Score = 36.2 bits (82),  Expect = 3.5, Method: Composition-based stats.
 Identities = 15/54 (28%), Positives = 28/54 (52%), Gaps = 0/54 (0%)

Query  49   DYGYEGTFYVTEDGETYDNEYMNTHNPIRTGVNFYEVSNWRYNEGKEMYEPVIR  102
            D+ Y   ++  +D + Y+N+  N ++ I T     +VS+W    G + Y P I+
Sbjct  648  DFSYNENYFFGQDQQLYENKIYNLNSTISTSFTLQKVSDWTLEIGHQYYSPSIQ  701


>gi|657610245|ref|WP_029421384.1| MlrC domain protein [Alicyclobacillus macrosporangiidus]
Length=490

 Score = 35.0 bits (79),  Expect = 7.0, Method: Composition-based stats.
 Identities = 27/78 (35%), Positives = 38/78 (49%), Gaps = 8/78 (10%)

Query  28   GIGDRSASLIELIGTERVSRRDYGYEGTFYVTEDGETYDNEYMNTHNPIRTGVNFYEVSN  87
            GI D   +L++ I      RRD GYE    VT D      E M     +  GVNFY  ++
Sbjct  112  GIDDLEGTLLKAI------RRDVGYEVPIVVTLDLHGNITEQMVQEADVLLGVNFYPHTD  165

Query  88   WRYNEGKEMYEPVIRRIV  105
              Y+ G+E  + V +R+V
Sbjct  166  -SYDRGREAID-VAKRLV  181



Lambda      K        H        a         alpha
   0.317    0.137    0.405    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 438877747044