bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-14_CDS_annotation_glimmer3.pl_2_4

Length=64
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|488392474|ref|WP_002461859.1|  serine protease                     34.3    5.1


>gi|488392474|ref|WP_002461859.1| serine protease [Staphylococcus simiae]
 gi|357259117|gb|EHJ08967.1| serine protease HtrA, putative [Staphylococcus simiae CCM 7213]
Length=417

 Score = 34.3 bits (77),  Expect = 5.1, Method: Composition-based stats.
 Identities = 22/54 (41%), Positives = 33/54 (61%), Gaps = 2/54 (4%)

Query  12   KGDEITTIEEAENLKKA-LRQVSYFEKKTGYEIVSIEIIKNGKEEETKILLDKQ  64
            KGD IT I+  E      LR   Y  KK G E+V++ II++GK+++ K+ L +Q
Sbjct  341  KGDIITKIDNTEVKDDVDLRSYLYEHKKPG-ELVTLSIIRDGKKKDVKVTLKEQ  393



Lambda      K        H        a         alpha
   0.310    0.131    0.353    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 442369130868