bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-5_CDS_annotation_glimmer3.pl_2_2

Length=62
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_feces_C_014_Microviridae_AG0148_putative.VP1           20.0    2.8
  Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1       18.5    8.4


> Gokush_Human_feces_C_014_Microviridae_AG0148_putative.VP1
Length=566

 Score = 20.0 bits (40),  Expect = 2.8, Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 0/18 (0%)

Query  5    DGGKPSNPMLVNANGSDL  22
            DGG  ++   V AN +DL
Sbjct  162  DGGTTADASKVTANANDL  179


> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780

 Score = 18.5 bits (36),  Expect = 8.4, Method: Composition-based stats.
 Identities = 6/15 (40%), Positives = 9/15 (60%), Gaps = 0/15 (0%)

Query  48   TPCETDPCVESFKKE  62
            T C   P + +FKK+
Sbjct  247  TKCSKTPVILTFKKK  261



Lambda      K        H        a         alpha
   0.316    0.136    0.427    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3725514