bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_2

Length=53
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Pichovirinae_Bourget_523_Microviridae_AG0337_hypothetical.prote...  19.2    3.6  
  Gokush_JCVI_001_Microviridae_AG023_putative.VP3                     18.9    5.1
  Alpavirinae_Human_gut_32_015_Microviridae_AG0214_putative.VP4       18.5    8.0
  Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH      18.1    8.8


> Pichovirinae_Bourget_523_Microviridae_AG0337_hypothetical.protein.BACEGG.02723
Length=307

 Score = 19.2 bits (38),  Expect = 3.6, Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 0/20 (0%)

Query  2    TNFHNAIGAGRKAGEKLRGN  21
            TNF  ++   R A E+ R N
Sbjct  166  TNFQYSVEGARLANEQTRAN  185


> Gokush_JCVI_001_Microviridae_AG023_putative.VP3
Length=142

 Score = 18.9 bits (37),  Expect = 5.1, Method: Compositional matrix adjust.
 Identities = 6/18 (33%), Positives = 11/18 (61%), Gaps = 0/18 (0%)

Query  1   VTNFHNAIGAGRKAGEKL  18
           +T++H A+ A R+  E  
Sbjct  66  ITDYHTAMNAIRRGDEAF  83


> Alpavirinae_Human_gut_32_015_Microviridae_AG0214_putative.VP4
Length=489

 Score = 18.5 bits (36),  Expect = 8.0, Method: Compositional matrix adjust.
 Identities = 5/14 (36%), Positives = 12/14 (86%), Gaps = 0/14 (0%)

Query  23  NKAMDNIKNGHGID  36
           ++A++NIK  +G++
Sbjct  75  DEAIENIKKQYGVE  88


> Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH
Length=352

 Score = 18.1 bits (35),  Expect = 8.8, Method: Composition-based stats.
 Identities = 6/10 (60%), Positives = 9/10 (90%), Gaps = 0/10 (0%)

Query  22   MNKAMDNIKN  31
            +NKAM+N+ N
Sbjct  159  LNKAMENLTN  168



Lambda      K        H        a         alpha
   0.313    0.133    0.382    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3725848