bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-2_CDS_annotation_glimmer3.pl_2_7
Length=155
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_E_011_Microviridae_AG0388_putative.VP1 265 4e-87
Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1 171 6e-52
Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1 170 9e-52
Alpavirinae_Human_feces_A_034_Microviridae_AG0105_putative.VP1 140 3e-41
Alpavirinae_Human_feces_C_043_Microviridae_AG0322_putative.VP1 133 1e-38
Alpavirinae_Human_feces_A_021_Microviridae_AG077_putative.VP1 132 4e-38
Alpavirinae_Human_gut_33_005_Microviridae_AG0184_putative.VP1 132 6e-38
Alpavirinae_Human_feces_D_031_Microviridae_AG0425_putative.VP1 131 1e-37
Alpavirinae_Human_feces_D_008_Microviridae_AG098_putative.VP1 125 9e-36
Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1 122 2e-34
> Alpavirinae_Human_feces_E_011_Microviridae_AG0388_putative.VP1
Length=622
Score = 265 bits (676), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 130/155 (84%), Positives = 134/155 (86%), Gaps = 2/155 (1%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFDNDLESDFDFLGYNPR 60
LDYAI+GQD QLLCTSVEDLPIPEFDNIGMEAVPA TLFNS FD +DF LGYNPR
Sbjct 470 LDYAITGQDPQLLCTSVEDLPIPEFDNIGMEAVPATTLFNSVLFDGTAVNDF--LGYNPR 527
Query 61 YWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGSSQASISWPFFKVNPNTLDSI 120
YWPWKSKIDRVHGAF TTLKDWVAPIDD YL+ WF S ASISWPFFKVNPNTLDSI
Sbjct 528 YWPWKSKIDRVHGAFTTTLKDWVAPIDDDYLHNWFNSKDGKSASISWPFFKVNPNTLDSI 587
Query 121 FAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
FAV ADS WE+DQLLINCDVSCKVVRPLSQDGMPY
Sbjct 588 FAVVADSIWETDQLLINCDVSCKVVRPLSQDGMPY 622
> Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1
Length=614
Score = 171 bits (432), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 84/162 (52%), Positives = 113/162 (70%), Gaps = 12/162 (7%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFDNDLESDFDFL--GYN 58
LDY ++GQD QLL T E LPIPEFDNIG+E +P +FNS+ L + F+ GYN
Sbjct 458 LDYTLTGQDGQLLVTDAESLPIPEFDNIGLEVLPMAQIFNSS-----LATAFNLFNAGYN 512
Query 59 PRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGS-----SQASISWPFFKVN 113
PRY+ WK+K+D ++GAF TTLK WV+P+ + L+ W G S ++A +++ FFKVN
Sbjct 513 PRYFNWKTKLDVINGAFTTTLKSWVSPVSESLLSGWARFGASDSKTGTKAVLNYKFFKVN 572
Query 114 PNTLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
P+ LD IF V ADSTW++DQLL+N + C VVR LS+DG+PY
Sbjct 573 PSVLDPIFGVKADSTWDTDQLLVNSYIGCYVVRNLSRDGVPY 614
> Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1
Length=607
Score = 170 bits (430), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 87/168 (52%), Positives = 111/168 (66%), Gaps = 22/168 (13%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNS------NAFDNDLESDFDF 54
LDY I+GQD QLL T E LPIPEFDNIGME +P +FNS N F+
Sbjct 449 LDYTITGQDGQLLVTDAESLPIPEFDNIGMETLPMTQIFNSPKASIVNLFN--------- 499
Query 55 LGYNPRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGS-------SQASISW 107
GYNPRY+ WK+K+D ++GAF TTLK WV+P+ + L+ WF G S ++ +++
Sbjct 500 AGYNPRYFNWKTKLDVINGAFTTTLKSWVSPVTESLLSGWFGFGYSEGDVNSQNKVVLNY 559
Query 108 PFFKVNPNTLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
FFKVNP+ LD IF VAADSTW+SDQLL+N + C V R LS+DG+PY
Sbjct 560 KFFKVNPSVLDPIFGVAADSTWDSDQLLVNSYIGCYVARNLSRDGVPY 607
> Alpavirinae_Human_feces_A_034_Microviridae_AG0105_putative.VP1
Length=618
Score = 140 bits (354), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/158 (47%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query 1 LDYAISGQDSQLLCT-SVEDLPIPEFDNIGMEAVPAITLFNSNAFDNDLESDFDFLGYNP 59
LDY +G D QL+ T E P+PEFD++GME++P ++L NS A + + + GY P
Sbjct 463 LDYVPTGPDLQLMSTVKGESWPVPEFDSLGMESLPMLSLVNSKAIGDIVARSY--AGYVP 520
Query 60 RYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGSSQAS--ISWPFFKVNPNTL 117
RY WK+ ID V GAF TLK W AP+D Y++ +F + S +S+ +FKVNP+ L
Sbjct 521 RYISWKTSIDVVRGAFTDTLKSWTAPVDSDYMHVFFGEVIPQEGSPILSYTWFKVNPSVL 580
Query 118 DSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
+ IFAV+ D +W +DQLL NC KV R LS DGMPY
Sbjct 581 NPIFAVSVDGSWNTDQLLCNCQFDVKVARNLSYDGMPY 618
> Alpavirinae_Human_feces_C_043_Microviridae_AG0322_putative.VP1
Length=602
Score = 133 bits (335), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/158 (47%), Positives = 95/158 (60%), Gaps = 3/158 (2%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFD-NDLESDFDFLGYNP 59
LDY SGQD QLL T D+PIPEFD+IGMEA+P TLFN + + L + LGY+P
Sbjct 445 LDYLRSGQDLQLLSTLATDIPIPEFDHIGMEALPIETLFNEQSTEATALINSIPVLGYSP 504
Query 60 RYWPWKSKIDRVHGAFLTTLKDWVAP--IDDFYLNRWFASGGSSQASISWPFFKVNPNTL 117
RY +K+ +D V GAF TTL WVAP +++ F S S+++ FFKV P L
Sbjct 505 RYIAYKTSVDWVSGAFETTLDSWVAPLTVNEQITKLLFNPDSGSVYSMNYGFFKVTPRVL 564
Query 118 DSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
D IF TW+SDQ L+N + K V+ L +GMPY
Sbjct 565 DPIFVQECTDTWDSDQFLVNVSFNVKPVQNLDYNGMPY 602
> Alpavirinae_Human_feces_A_021_Microviridae_AG077_putative.VP1
Length=622
Score = 132 bits (332), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 12/165 (7%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFDNDLESDFDF------ 54
LDY +GQD LL TS E+ IPEFD IGM+ +P TLFNSN D SDF
Sbjct 460 LDYERTGQDQDLLITSAEEWAIPEFDAIGMQTLPLGTLFNSNKVSGD--SDFRLHGAAYP 517
Query 55 LGYNPRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFA----SGGSSQASISWPFF 110
+GY PRY WK+ ID + GAF ++ K WVAPID ++ W + + Q+ ++ +F
Sbjct 518 IGYVPRYVNWKTDIDEIFGAFRSSEKTWVAPIDADFITNWVKNVADNASAVQSLFNYNWF 577
Query 111 KVNPNTLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
KVNP LD IFAV ADST ++D +S K VR L GMPY
Sbjct 578 KVNPAILDDIFAVKADSTMDTDTFKTRMMMSIKCVRNLDYSGMPY 622
> Alpavirinae_Human_gut_33_005_Microviridae_AG0184_putative.VP1
Length=618
Score = 132 bits (331), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/160 (46%), Positives = 95/160 (59%), Gaps = 9/160 (6%)
Query 1 LDYAISGQDSQLLCTSVEDL-PIPEFDNIGMEAVPAITLFNSNAFDNDLESDFDFLGYNP 59
LDYA +G D Q + T D P+PE D+IG E +P+ +L N+NA E GY P
Sbjct 463 LDYAPTGPDLQFMTTVDGDSWPVPEMDSIGFEELPSYSLLNTNAVQPIKEPRP--FGYVP 520
Query 60 RYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWF----ASGGSSQASISWPFFKVNPN 115
RY WK+ +D V GAF+ TLK W API YL +F GG+ +W FKVNP+
Sbjct 521 RYISWKTSVDVVRGAFIDTLKSWTAPIGQDYLKIYFDNNNVPGGAHFGFYTW--FKVNPS 578
Query 116 TLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
++ IF V AD +W +DQLL+NCD +V R LS DG+PY
Sbjct 579 VVNPIFGVVADGSWNTDQLLVNCDFDVRVARNLSYDGLPY 618
> Alpavirinae_Human_feces_D_031_Microviridae_AG0425_putative.VP1
Length=614
Score = 131 bits (329), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/161 (43%), Positives = 96/161 (60%), Gaps = 6/161 (4%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFD--NDLESDFDFLGYN 58
LDY I+GQ LL T+ DLP PEFD+IGM+ + NS + + ++ +GY
Sbjct 454 LDYVITGQPQNLLYTNTADLPFPEFDSIGMQTIQFGRFVNSKSVSWTSGVDYRVQTMGYL 513
Query 59 PRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGSSQASIS----WPFFKVNP 114
PR++ K++ D V GAF +TLK+WVAP+D Y+++W S +S ++ + FFKVNP
Sbjct 514 PRFFDVKTRYDEVLGAFRSTLKNWVAPLDPSYVSKWLQSSVTSSGKLALNLNYGFFKVNP 573
Query 115 NTLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
LDSIF V DST ++DQ L + K VR DGMPY
Sbjct 574 RVLDSIFNVKCDSTIDTDQFLTALYMDIKAVRNFDYDGMPY 614
> Alpavirinae_Human_feces_D_008_Microviridae_AG098_putative.VP1
Length=618
Score = 125 bits (315), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 95/161 (59%), Gaps = 6/161 (4%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFD--NDLESDFDFLGYN 58
LDY I+GQ LL T+ DLP PE+D+IGM+ + NS A + ++ +GY
Sbjct 458 LDYVITGQPQNLLYTNTADLPFPEYDSIGMQTIQFGRFVNSKAVGWTSGVDYRTQTMGYL 517
Query 59 PRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGSSQA----SISWPFFKVNP 114
PR++ K++ D V GAF +TLK+WVAP+D L +W + +S ++++ FFKVNP
Sbjct 518 PRFFDVKTRYDEVLGAFRSTLKNWVAPLDPANLPQWLQTSVTSSGKLFLNLNYGFFKVNP 577
Query 115 NTLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
LDSIF V DST ++DQ L + K VR DGMPY
Sbjct 578 RVLDSIFNVKCDSTIDTDQFLTTLYMDIKAVRNFDYDGMPY 618
> Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1
Length=584
Score = 122 bits (305), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/160 (42%), Positives = 90/160 (56%), Gaps = 6/160 (4%)
Query 1 LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFD-----NDLESDFDFL 55
LDY IS D QL + P+PE D IG+E + + +++N + ++ +
Sbjct 426 LDYVISAPDPQLFASMNTSFPVPELDAIGLEPI-TVAYYSNNPIELPSTGGITDAPTTTV 484
Query 56 GYNPRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGSSQASISWPFFKVNPN 115
GY PRY+ WK+ ID V GAF TT K+WVAPI + G+ I++ FFKVNP+
Sbjct 485 GYLPRYYAWKTSIDYVLGAFTTTEKEWVAPITPELWSNMLKPLGTKGTGINYNFFKVNPS 544
Query 116 TLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY 155
LD IFAV ADS W++D LIN +V R L DGMPY
Sbjct 545 ILDPIFAVNADSYWDTDTFLINAAFDIRVARNLDYDGMPY 584
Lambda K H a alpha
0.320 0.137 0.444 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 10396563