bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-21_CDS_annotation_glimmer3.pl_2_1
Length=76
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.p... 73.2 6e-20
Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.... 72.0 1e-19
Alpavirinae_Human_feces_B_020_Microviridae_AG0348_hypothetical.... 72.0 1e-19
Alpavirinae_Human_feces_C_029_Microviridae_AG0112_hypothetical.... 65.9 3e-17
Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.... 63.9 2e-16
Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.p... 62.8 5e-16
Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.... 47.4 2e-10
Alpavirinae_Human_feces_A_016_Microviridae_AG003_hypothetical.p... 42.0 2e-08
Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.p... 39.7 1e-07
Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.p... 39.7 1e-07
> Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.protein
Length=79
Score = 73.2 bits (178), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query 2 NFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAMLE 61
N + F VR + E D ++ITIGN LA+EE+FK+ + A+M+INKTDWNLV++LF A+ E
Sbjct 3 NLKDAFIVRPLP--ESDEFIITIGNHLATEEKFKSRKAAEMRINKTDWNLVSALFYALKE 60
Query 62 GEKKQQE--ENIKQTEE 76
+K +E E +KQ +E
Sbjct 61 ADKWAEENPELVKQNKE 77
> Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.protein
Length=79
Score = 72.0 bits (175), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query 2 NFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAMLE 61
N + F VR + E D ++ITIGN LA+EE+FK+ + A+M+INKTDWNLV++L A+ E
Sbjct 3 NLKDAFIVRPLP--ESDEFIITIGNHLATEEKFKSRKAAEMRINKTDWNLVSALIYALKE 60
Query 62 GEK--KQQEENIKQTEE 76
+K ++ E IKQ EE
Sbjct 61 ADKWAEKNPELIKQNEE 77
> Alpavirinae_Human_feces_B_020_Microviridae_AG0348_hypothetical.protein
Length=81
Score = 72.0 bits (175), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 53/68 (78%), Gaps = 2/68 (3%)
Query 1 MNFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAML 60
++ E FKVR + ++EE Y+ITIGN LA+EE+FK+A+ AQM+INKT+W+LV++L A+
Sbjct 2 ISLKEAFKVRQLPESEE--YIITIGNHLATEEKFKSAKAAQMQINKTNWDLVSALVYALK 59
Query 61 EGEKKQQE 68
E +K +E
Sbjct 60 EADKWAEE 67
> Alpavirinae_Human_feces_C_029_Microviridae_AG0112_hypothetical.protein
Length=75
Score = 65.9 bits (159), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/75 (47%), Positives = 53/75 (71%), Gaps = 3/75 (4%)
Query 2 NFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAMLE 61
N E F +R NE + ++ITIGN LA+EE+FK+ + A+M+INKTDWNLVA++ A+ E
Sbjct 3 NLKEAFVIRPTDTNENE-FMITIGNHLATEEKFKSRKAAEMRINKTDWNLVAAMVYALKE 61
Query 62 GEKKQQEENIKQTEE 76
+ + E++IK E+
Sbjct 62 AD--EFEKSIKNQED 74
> Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.protein
Length=75
Score = 63.9 bits (154), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 29/62 (47%), Positives = 45/62 (73%), Gaps = 1/62 (2%)
Query 2 NFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAMLE 61
N E F +R +E+ ++ITIGN LA+EE+FK+ + A+M+INKTDWNLV+++ A+ E
Sbjct 3 NLKEAFVIRPTD-TDENEFIITIGNHLATEEKFKSRKAAEMRINKTDWNLVSAMVYALKE 61
Query 62 GE 63
+
Sbjct 62 AD 63
> Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.protein
Length=79
Score = 62.8 bits (151), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 46/68 (68%), Gaps = 1/68 (1%)
Query 2 NFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAMLE 61
NFN+ F +R + + E + ++IT+G+ LA+ E FK+ +A+ I DWNLVASL +++E
Sbjct 7 NFNDAFIIRALNE-ENNDFIITLGDHLATPEHFKSYDEAENSIEAVDWNLVASLAMSLIE 65
Query 62 GEKKQQEE 69
G KK + E
Sbjct 66 GMKKMENE 73
> Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.protein
Length=87
Score = 47.4 bits (111), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/65 (37%), Positives = 40/65 (62%), Gaps = 3/65 (5%)
Query 1 MNFNEVFKVRTVKKNEEDT-YVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASLFAAM 59
M ++F VR NEE+ +++TIG LA+E++FKT ++AQ I+ W+ + +L M
Sbjct 1 MEVKDLFVVRAT--NEENNDFIVTIGRHLATEKKFKTKEEAQAYIDTPKWDTIVALCGEM 58
Query 60 LEGEK 64
+E K
Sbjct 59 IEAHK 63
> Alpavirinae_Human_feces_A_016_Microviridae_AG003_hypothetical.protein
Length=76
Score = 42.0 bits (97), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (7%)
Query 2 NFNEVFKVRTVKKNEEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASL-FAAML 60
NF ++ T EE+ YVI GN AS+E F T + AQ IN W+L+ ++ +AA
Sbjct 4 NFFKILPTNT----EENDYVIVCGNVQASKEHFNTVKAAQEYINTKPWDLIFTISYAAHK 59
Query 61 EGEKKQQEENIKQT 74
++ EEN +T
Sbjct 60 ALNAQEAEENKSET 73
> Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.protein
Length=72
Score = 39.7 bits (91), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 30/47 (64%), Gaps = 1/47 (2%)
Query 10 RTVKKN-EEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASL 55
R KKN EE+ YVI I + LAS+EEF T ++A+ I W L+ +L
Sbjct 8 RVQKKNVEEEKYVICIKDELASKEEFNTREEAEQYIESKPWELIFNL 54
> Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.protein
Length=72
Score = 39.7 bits (91), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 30/47 (64%), Gaps = 1/47 (2%)
Query 10 RTVKKN-EEDTYVITIGNRLASEEEFKTAQKAQMKINKTDWNLVASL 55
R KKN EE+ YVI I + LAS+EEF T ++A+ I W L+ +L
Sbjct 8 RIQKKNVEEEKYVICIKDELASKEEFNTREEAEQYIESKPWELIFNL 54
Lambda K H a alpha
0.308 0.123 0.320 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3629730