bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-18_CDS_annotation_glimmer3.pl_2_2
Length=73
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_E_007_Microviridae_AG0411_hypothetical.protein 111 8e-35
Gokush_Human_feces_E_017_Microviridae_AG0126_hypothetical.protein 87.8 9e-26
Gokush_Human_feces_A_020_Microviridae_AG0267_hypothetical.protein 55.8 1e-13
Gokush_Human_feces_A_019_Microviridae_AG0439_hypothetical.protein 51.6 6e-12
Alpavirinae_Human_feces_D_022_Microviridae_AG0391_hypothetical.... 20.8 2.2
Gokush_Bourget_259_Microviridae_AG072_putative.nonstructural.pr... 20.0 2.8
Gokush_Bourget_164_Microviridae_AG047_putative.nonstructural.pr... 19.6 3.8
Gokush_Bourget_154_Microviridae_AG0431_putative.nonstructural.p... 19.6 3.8
Gokush_Pavin_110_Microviridae_AG054_putative.nonstructural.protein 19.6 4.3
Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1 19.6 5.8
> Gokush_Human_feces_E_007_Microviridae_AG0411_hypothetical.protein
Length=80
Score = 111 bits (277), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 63/72 (88%), Gaps = 0/72 (0%)
Query 2 LHKTWNVRDQTEKDLRLEADNLYRKIETQYKLIKKISDKEEAHKIIDRIWIMKTWANDIQ 61
+HKTWNVRDQTE+ LRLEA+ LY++IE YK+IKK+S E+A KIIDRIWIMK WANDI+
Sbjct 1 MHKTWNVRDQTEEGLRLEAERLYKQIEAGYKMIKKVSSSEDAKKIIDRIWIMKKWANDIE 60
Query 62 LELIRREYNNEA 73
LEL+RREY +EA
Sbjct 61 LELLRREYTHEA 72
> Gokush_Human_feces_E_017_Microviridae_AG0126_hypothetical.protein
Length=75
Score = 87.8 bits (216), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 43/72 (60%), Positives = 54/72 (75%), Gaps = 0/72 (0%)
Query 1 MLHKTWNVRDQTEKDLRLEADNLYRKIETQYKLIKKISDKEEAHKIIDRIWIMKTWANDI 60
M+ K+WNVRDQTE +LR + + LY IE +Y LIKK+S E+A KIID IW MK WANDI
Sbjct 1 MIAKSWNVRDQTENELRFQEEKLYTNIEAKYMLIKKVSKIEDAKKIIDEIWRMKKWANDI 60
Query 61 QLELIRREYNNE 72
++EL+RR N E
Sbjct 61 EIELMRRRANGE 72
> Gokush_Human_feces_A_020_Microviridae_AG0267_hypothetical.protein
Length=75
Score = 55.8 bits (133), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (60%), Gaps = 0/72 (0%)
Query 1 MLHKTWNVRDQTEKDLRLEADNLYRKIETQYKLIKKISDKEEAHKIIDRIWIMKTWANDI 60
M KTWNVRDQ + L+ E + Y I + I K + EEA K+++ + KT ANDI
Sbjct 1 MQVKTWNVRDQPTEALKKECEKCYTIIVKYNRWIAKAATMEEAKKLVEEKYAYKTKANDI 60
Query 61 QLELIRREYNNE 72
+LEL+RR N E
Sbjct 61 ELELMRRRANGE 72
> Gokush_Human_feces_A_019_Microviridae_AG0439_hypothetical.protein
Length=76
Score = 51.6 bits (122), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (58%), Gaps = 0/69 (0%)
Query 4 KTWNVRDQTEKDLRLEADNLYRKIETQYKLIKKISDKEEAHKIIDRIWIMKTWANDIQLE 63
KTWNVRDQT + L+ E D Y I + I + + EEA +ID + K AN+I+LE
Sbjct 5 KTWNVRDQTTEVLKKEVDKCYTMIVKYNRWIARAASAEEAKSLIDEKFNYKAKANNIELE 64
Query 64 LIRREYNNE 72
L+RR E
Sbjct 65 LMRRRAEGE 73
> Alpavirinae_Human_feces_D_022_Microviridae_AG0391_hypothetical.protein.BACEGG.02723
Length=367
Score = 20.8 bits (42), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query 21 DNLYRKIETQYKLIKKISDKEEAHKIIDRI---------WIMKTWANDIQLELIR 66
+N+ ++IET+Y I+D + I I KT A+ I +EL+R
Sbjct 187 NNILKEIETKYAEANAIADLDTKQAKIGEINASALERLASAAKTDADRITVELLR 241
> Gokush_Bourget_259_Microviridae_AG072_putative.nonstructural.protein
Length=87
Score = 20.0 bits (40), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 0/31 (0%)
Query 3 HKTWNVRDQTEKDLRLEADNLYRKIETQYKL 33
H+ VRD T++ R ADN K + L
Sbjct 24 HRNVAVRDFTDEINRASADNPLNKHPDDFDL 54
> Gokush_Bourget_164_Microviridae_AG047_putative.nonstructural.protein
Length=84
Score = 19.6 bits (39), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (52%), Gaps = 0/31 (0%)
Query 3 HKTWNVRDQTEKDLRLEADNLYRKIETQYKL 33
H+ +RD T++ R+ ADN K + L
Sbjct 24 HRNVAIRDFTDEVNRVAADNQLNKHPDDFDL 54
> Gokush_Bourget_154_Microviridae_AG0431_putative.nonstructural.protein
Length=85
Score = 19.6 bits (39), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (52%), Gaps = 0/31 (0%)
Query 3 HKTWNVRDQTEKDLRLEADNLYRKIETQYKL 33
H+ +RD T++ R+ ADN K + L
Sbjct 24 HRNVAIRDFTDEVNRVAADNQLNKHPDDFDL 54
> Gokush_Pavin_110_Microviridae_AG054_putative.nonstructural.protein
Length=85
Score = 19.6 bits (39), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 16/31 (52%), Gaps = 0/31 (0%)
Query 3 HKTWNVRDQTEKDLRLEADNLYRKIETQYKL 33
H+ +RD T++ R+ ADN K + L
Sbjct 24 HRNVAIRDFTDEVNRVAADNQLNKHPDDFDL 54
> Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1
Length=518
Score = 19.6 bits (39), Expect = 5.8, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 11/19 (58%), Gaps = 0/19 (0%)
Query 19 EADNLYRKIETQYKLIKKI 37
E DN+Y I K I+K+
Sbjct 492 EVDNIYGHIFNNIKAIRKM 510
Lambda K H a alpha
0.317 0.133 0.392 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3681480