bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-17_CDS_annotation_glimmer3.pl_2_3
Length=345
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_029_Microviridae_AG0111_putative.VP2 422 3e-149
Alpavirinae_Human_feces_A_048_Microviridae_AG090_hypothetical.p... 131 2e-36
Alpavirinae_Human_feces_B_021_Microviridae_AG0370_hypothetical.... 130 2e-36
Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2 109 5e-29
Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH 103 6e-27
Alpavirinae_Human_feces_B_023_Microviridae_AG0140_putative.VP2 65.1 9e-14
Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2 60.1 7e-12
Alpavirinae_Human_gut_30_040_Microviridae_AG0135_hypothetical.p... 54.7 4e-10
Alpavirinae_Human_gut_32_015_Microviridae_AG0210_hypothetical.p... 48.9 2e-08
Alpavirinae_Human_feces_A_016_Microviridae_AG006_putative.VP2 48.5 4e-08
> Alpavirinae_Human_feces_C_029_Microviridae_AG0111_putative.VP2
Length=329
Score = 422 bits (1086), Expect = 3e-149, Method: Compositional matrix adjust.
Identities = 224/308 (73%), Positives = 259/308 (84%), Gaps = 0/308 (0%)
Query 19 NSAQSSQYQENLALMKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIY 78
+ A + Q+ L LM+ Q + N++ A + KDLWDYTNYEN +HI+ AGL+P L+Y
Sbjct 3 SGAANEQWGNQLKLMEIQNRYNEQMAKNNQQRNKDLWDYTNYENQKQHIENAGLNPALMY 62
Query 79 gqggaggttsgagqasgVGMPSKTGTEAGLQAQGMALQLANMASQVRLNESQADKNEADA 138
G GG GG ++ Q GV P+ E GL+ QG+ LQLA++ASQV LN+SQA+KN+A+A
Sbjct 63 GMGGGGGISANGAQGQGVTQPTDRSVEMGLKQQGLGLQLASIASQVDLNKSQAEKNKAEA 122
Query 139 NKTRGIDTKLQEATIDNLIAQTSNEKVKKGLILGQIRVADAEEELKRNMADWTKDKADET 198
K G+DT+ QEATIDNLIAQTSNEKVKKGLILGQIRVADAEEELKRNMADWTKDKADET
Sbjct 123 EKISGVDTRAQEATIDNLIAQTSNEKVKKGLILGQIRVADAEEELKRNMADWTKDKADET 182
Query 199 RWNIKSLQKGIDKLTEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQQKVN 258
RWNIKSLQKGIDKL EEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQ+KVN
Sbjct 183 RWNIKSLQKGIDKLIEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQRKVN 242
Query 259 EEQAKAIPQQILQGWEDLTKKGKALIIQREQMEAYVQDVFNRYDLGKRGLDIEEQKLIKD 318
EEQAKAIP +ILQGWE L K+GKALI QR+Q+EAYVQDV NRY+LGK+GLDIEEQKL+KD
Sbjct 243 EEQAKAIPAEILQGWEKLVKEGKALINQRDQIEAYVQDVINRYELGKKGLDIEEQKLVKD 302
Query 319 IVLGMLEI 326
++LGMLEI
Sbjct 303 VILGMLEI 310
> Alpavirinae_Human_feces_A_048_Microviridae_AG090_hypothetical.protein.BACPLE.00802
Length=333
Score = 131 bits (329), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 168/302 (56%), Gaps = 34/302 (11%)
Query 25 QYQENLALMKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgqggag 84
Q +N LM QA+LN++QA YST LAK+ WDYTNYENS+KH+K AGL+P L Y G
Sbjct 2 QRSDNEYLMNKQAELNKEQADYSTDLAKNYWDYTNYENSVKHLKEAGLNPALFY-AKGGQ 60
Query 85 gttsgagqasgVGMPSKTGTEAGLQAQGMALQLANMASQVRLNESQADKNEADANKTRGI 144
G +G GQA GVG+P T T A +QAQGM QL N+ SQV LN++ A K EA+A K G
Sbjct 61 GGATGGGQAQGVGLPPTTPTMARIQAQGMGAQLQNVLSQVELNKATAKKTEAEAEKIAGA 120
Query 145 DTKLQEATIDNLIAQTS-NEKVKKGLILGQIRVADAEEEL-----KRNMADWTKDKADET 198
DTK+ E + L +Q+ N ++ R+ D+ E+L ++ A++ +A E
Sbjct 121 DTKVAEREAEMLESQSEFNRRI--------TRLQDSIEKLTNAQEQKTAAEYFYTQAQE- 171
Query 199 RWNIKSLQKGIDKLTEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQQKVN 258
K+ EE+ + +++ E T + ++++ L NLM + ++QK+N
Sbjct 172 -----------KKVWEEVREQIVKSDVAEETKEAMIRKTGLENFNLMQAGIESITRQKLN 220
Query 259 EEQAKAIPQQILQGWEDLTKKGKALIIQREQMEAYVQDVFNRYDLGKRGLDIEEQKLIKD 318
EQ + Q+ GW ++ K++ + ++ + N +G + LD ++++LIKD
Sbjct 221 SEQINYLRGQLAIGWANVAIGEKSVSNEADR-------IANELMMGMKDLDRKDRELIKD 273
Query 319 IV 320
+
Sbjct 274 WI 275
> Alpavirinae_Human_feces_B_021_Microviridae_AG0370_hypothetical.protein.BACPLE.00802
Length=333
Score = 130 bits (328), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 169/302 (56%), Gaps = 34/302 (11%)
Query 25 QYQENLALMKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgqggag 84
Q +N LM QA+LN++QA YST LAK+ WDYTNYENS+KH+K AGL+P L Y G
Sbjct 2 QRADNEYLMNKQAELNKEQADYSTDLAKNYWDYTNYENSVKHLKEAGLNPALFY-AKGGQ 60
Query 85 gttsgagqasgVGMPSKTGTEAGLQAQGMALQLANMASQVRLNESQADKNEADANKTRGI 144
G +G GQA GVG+PS T T A +QAQGM QL N+ SQV LN++ A K EA+A K G
Sbjct 61 GGATGGGQAQGVGLPSTTPTMARIQAQGMGAQLQNVLSQVELNKATAKKTEAEAEKIAGA 120
Query 145 DTKLQEATIDNLIAQTS-NEKVKKGLILGQIRVADAEEEL-----KRNMADWTKDKADET 198
DTK+ E + L +Q+ N++V K + D+ E+L ++ A++ +A E
Sbjct 121 DTKVAEREAEMLESQSEFNKRVTK--------LQDSIEKLNKAQEQKTAAEYFYTQAQE- 171
Query 199 RWNIKSLQKGIDKLTEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQQKVN 258
K+ EE+ + +++ E T + ++ + L NLM + ++QK+N
Sbjct 172 -----------KKVWEEVREQIVKSDVAEETKEAMIERAGLENFNLMQAGIESITRQKLN 220
Query 259 EEQAKAIPQQILQGWEDLTKKGKALIIQREQMEAYVQDVFNRYDLGKRGLDIEEQKLIKD 318
EQ + Q+ GW ++ K++ + ++ + N +G + LD ++++LIKD
Sbjct 221 SEQINYLKGQLAIGWANVAIGEKSVSNEADR-------IANELMMGMKDLDRKDRELIKD 273
Query 319 IV 320
+
Sbjct 274 WI 275
> Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2
Length=325
Score = 109 bits (273), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 158/289 (55%), Gaps = 23/289 (8%)
Query 33 MKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgqggaggttsgagq 92
M+ Q + N++ A + KDLWDYTNYEN +HIK AGL+P L+YG GG GG ++ Q
Sbjct 1 MEIQNRYNEQMAKNNQQRNKDLWDYTNYENQKQHIKNAGLNPALMYGMGGGGGVSANGAQ 60
Query 93 asgVGMPSKTGTEAGLQAQGMALQLANMASQVRLNESQADKNEADANKTRGIDTKLQEAT 152
GV P+ E L+ QG+ LQLA++ASQV LN+S A+KN+ +A+K G DTK+ E
Sbjct 61 GQGVTQPTDRSVEMKLKQQGLGLQLASIASQVELNKSLAEKNKVEADKIAGADTKVAEKQ 120
Query 153 IDNLIAQTS-NEKVKKGLILGQIRVADAEEELKRNMADWTKDKADETRWNIKSLQKGIDK 211
+ L +Q+ N+++ K + D+ E+L T + +T +Q K
Sbjct 121 AEMLESQSEFNKRITK--------LQDSIEKL-------TNAQEQKTAAEYFYIQAQEKK 165
Query 212 LTEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQQKVNEEQAKAIPQQILQ 271
+ EE+ + ++ E T + ++++ L NLM + ++QK+N EQ + QI
Sbjct 166 VWEEVREQVVKADVAENTKEAMIQKAVLENFNLMQTGIESITRQKLNNEQINYLKGQIAI 225
Query 272 GWEDLTKKGKALIIQREQMEAYVQDVFNRYDLGKRGLDIEEQKLIKDIV 320
GW ++ K++ + ++ + N +G R LD ++++LIKD +
Sbjct 226 GWANVAIGEKSVSNESDR-------IANELMIGIRDLDRKDRELIKDWI 267
> Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH
Length=352
Score = 103 bits (257), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/309 (35%), Positives = 165/309 (53%), Gaps = 44/309 (14%)
Query 21 AQSSQYQENLALMKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgq 80
A+ Y + LM Q LN K A + AK +WDYTN+EN +H+ A LSPGL YG
Sbjct 25 AEERAYTKQKELMDKQYALNDKMAEANQQRAKYMWDYTNFENQKQHLLNANLSPGLFYGG 84
Query 81 ggaggttsgagqasgVGMPSKTGTEAGLQAQGMALQLANMASQVRLNESQADKNEADANK 140
GAGG+T+ GQ SGVG+ ++TG G+Q + + LQLA+MASQV LN+SQA+KN A+A K
Sbjct 85 SGAGGSTTSGGQGSGVGLGTETGVGYGIQEKALGLQLASMASQVALNQSQANKNNAEAKK 144
Query 141 TRGIDTKLQEATIDNLIAQTSNEKVKKGLILGQIRVADAEEELKRNMADWTKDKADETRW 200
G+DT+L E+ Q ++ A E L TK++ + +
Sbjct 145 ISGVDTQLTES---------------------QTKLNKAMENLTN-----TKEQREAADY 178
Query 201 NIKSLQKGIDKLTEEINGMKLDNELKERT----IDNKVKE---SSLTLQNLMAEILLKGS 253
+ +LQ+ K+ EE M L N++ E T ID V+ +SLT +A I LKG
Sbjct 179 FV-ALQEQ-SKVFEEARAMALQNDITEATKQTQIDTVVQNYYLNSLTAFEKIAGIELKG- 235
Query 254 QQKVNEEQAKAIPQQI-LQGWEDLTKKGKALIIQREQMEAYVQDVFNRYDLGKRGLDIEE 312
++A I +QI +E +TK+ A +Q A + V N +++ + LD E+
Sbjct 236 ------QEAAYISKQIEWYSFEAITKRMSAEAMQSMAKSA-AERVKNDFEIAGKKLDQEQ 288
Query 313 QKLIKDIVL 321
++++++ +
Sbjct 289 ERILQNWIF 297
> Alpavirinae_Human_feces_B_023_Microviridae_AG0140_putative.VP2
Length=295
Score = 65.1 bits (157), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 76/125 (61%), Gaps = 7/125 (6%)
Query 33 MKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgqggaggttsgagq 92
M QAK N++QA YS LA D+W+ TNYE+ ++H+KAAGL+P L+Y +GGAGG+TSGAG
Sbjct 19 MALQAKYNKEQADYSQQLALDMWNATNYESQVEHMKAAGLNPALLYSKGGAGGSTSGAGT 78
Query 93 asgVGMPSKTGTEAGLQAQGMALQLANMASQVRLNESQADKNEADANKTRGIDTKLQEAT 152
A P GT QA GM LQ +A ++ K A+ K G+DT+ + +
Sbjct 79 A----APVSDGT---TQAVGMGLQAKQIAISQAQQMAETAKTVAETAKISGVDTESVKTS 131
Query 153 IDNLI 157
I ++
Sbjct 132 IKKML 136
> Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2
Length=360
Score = 60.1 bits (144), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 80/146 (55%), Gaps = 18/146 (12%)
Query 26 YQENLALMKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgqggagg 85
Y + +A++ Q L A S + KD+W+YTNYEN + H+KAAGL+P L+YG GG GG
Sbjct 36 YAKEMAMINNQYALGM--AKESHNMNKDMWNYTNYENQVAHMKAAGLNPALLYGNGGGGG 93
Query 86 ttsgagqasgV-GMPSKTGTEAGLQA--------QGMALQLANMASQVRLNESQADKNEA 136
T+ G A G P AG QA GM +QL M +Q R E+ A K EA
Sbjct 94 ATATGGTAIPGQGTPGSAPGGAGPQAIKSQIIESTGMGIQLGLMNAQKRNLEADAAKKEA 153
Query 137 DANKTRGIDT-------KLQEATIDN 155
+A KT G+DT KL EA I+N
Sbjct 154 EATKTAGVDTELAKTAAKLNEAKIEN 179
> Alpavirinae_Human_gut_30_040_Microviridae_AG0135_hypothetical.protein
Length=377
Score = 54.7 bits (130), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/103 (42%), Positives = 60/103 (58%), Gaps = 13/103 (13%)
Query 52 KDLWDYTNYENSMKHIKAAGLSPGLIYgqggaggttsgagqasgVGMPSKTGTEAGLQAQ 111
KD WDYTN EN ++H+K +GL+ GL+YGQ GAGG + G + +A
Sbjct 71 KDYWDYTNAENQVRHLKNSGLNIGLMYGQSGAGGMGASGGARQ------DSPDQAQGNPI 124
Query 112 GMALQLANMASQVRLN-------ESQADKNEADANKTRGIDTK 147
GMALQ+ + Q R+N E+QA+K A+ANK G+DT+
Sbjct 125 GMALQVQQLEQQRRMNDAQIALAEAQANKAGAEANKIAGVDTQ 167
> Alpavirinae_Human_gut_32_015_Microviridae_AG0210_hypothetical.protein
Length=341
Score = 48.9 bits (115), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/297 (26%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query 32 LMKYQAKLNQKQAYYSTGLAKDLWDYTNYENSMKHIKAAGLSPGLIYgqggaggttsgag 91
+M Q + N+ A + A ++W+ T YE + I+ AGL+ L+YG GGA T+ G
Sbjct 58 MMGLQYQYNEAAANNNMTRALEMWEKTGYEAQGQQIENAGLNKALMYGGGGASATSQSQG 117
Query 92 qasgVGMPSKTGTEA---GLQAQGMALQLANMASQVRLNESQADKNEADANKTRGIDTKL 148
+ + TGT+A GLQA+ M Q++N + L +QA K +A+K + I+ K+
Sbjct 118 NSGV----NNTGTQAVAMGLQARAMEAQVSNTEADTALKIAQAAKEAGEASK-KPIELKI 172
Query 149 QEATIDNLIAQTSNEKVKKGLILGQIRVADAEEELKRNMADWTKDKADETRWNIKSLQKG 208
+ QT+ E + D E+ LK A + A+E + QK
Sbjct 173 E---------QTNKE------------ITDLEKSLK---AQNVEIGANEMVRSTAIAQKA 208
Query 209 IDKLTEEINGMKLDNELKERTIDNKVKESSLTLQNLMAEILLKGSQQKVNEEQAKAIPQQ 268
+ EE+N ++ E+K+ T D +K + + NL +I L ++ K + +AI Q
Sbjct 209 M----EELNQAMMETEIKKETKDAIIKSTIKNVTNLEVQIALGIAKTKETNKNIEAIGGQ 264
Query 269 ILQGWEDLTKKGKALIIQREQMEAYVQDVFNRYDLGKRGLDIEEQKLIKDIVLGMLE 325
+ +D+ + +E + + + ++ + LD++E+++I D + G +E
Sbjct 265 LEALKKDVITRQITAEAAKENAKTLGERLIKEMEVKGQELDLQEKRMILDAIKGGVE 321
> Alpavirinae_Human_feces_A_016_Microviridae_AG006_putative.VP2
Length=367
Score = 48.5 bits (114), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (45%), Gaps = 39/278 (14%)
Query 53 DLWDYTNYENSMKHIKAAGLSPGLIYgqggaggttsgagqasgVGMPSKTGTEAGLQAQG 112
++W+ TN+ +H++ AGLS GL+YG GG G + G G P+ LQ +
Sbjct 90 EMWNQTNFGAQRQHMEDAGLSVGLMYGGGGQGAVSQGGQATQPSG-PTSNPVGMALQYKQ 148
Query 113 MALQLANMASQVRLNESQADKNEADANKTRGIDTKLQEA-----TIDNLIAQTSNEKVKK 167
+ Q + SQ LN+++A K A+A KT G+DTK E+ I+N I ++ +
Sbjct 149 IEQQNEAIKSQTMLNQAEAAKALAEAKKTGGVDTKKTESEIKWQEIENRIQESREQIASS 208
Query 168 GLILGQIRVADAEEELKRNMADWTKDKADETRWNIKSLQKGIDKLTEEINGMKLDNELKE 227
+I + EE K+ M + T + K+ Q+ I +T++++ ++ +E
Sbjct 209 NIIEAKANAKKTVEEFKQAMLN--------TEYLDKTQQQRIQMVTDQLSLIQKQGLKEE 260
Query 228 RTIDNKVKESSLTLQNLMAEILLKGSQQKVNEEQAKAIPQQILQGWEDLTKKGKALIIQR 287
ID + QA + ++I W D K + +
Sbjct 261 AVID-------------------------LTNAQASKVRKEIDILWYDAITKRTSADALK 295
Query 288 EQMEAYVQDVFNRYDLGKRGLDIEEQKLIKDIVLGMLE 325
+Q + V + Y+LGK L +EEQK +++ + G ++
Sbjct 296 KQADTAVDKIAKEYELGKGKLSLEEQKNLREWIYGGID 333
Lambda K H a alpha
0.310 0.127 0.340 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 29743416