bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-5_CDS_annotation_glimmer3.pl_2_5 Length=57 Score E Sequences producing significant alignments: (Bits) Value sus:Acid_7719 redoxin domain-containing protein 32.3 2.6 slt:Slit_2285 alkyl hydroperoxide reductase/Thiol specific ant... 31.6 5.2 tms:TREMEDRAFT_65525 hypothetical protein 31.6 5.8 syf:Synpcc7942_1942 bacterioferritin comigratory protein-like ... 31.2 7.9 syc:syc2152_c bacterioferritin comigratory protein 31.2 7.9 > sus:Acid_7719 redoxin domain-containing protein Length=151 Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/44 (39%), Positives = 25/44 (57%), Gaps = 4/44 (9%) Query 3 KKFVIFYYADSDYRHFSVEASSFSDAEKTANAFALRVGAIIVGI 46 K+ V+++Y +D +VEA F D K N + GAI+VGI Sbjct 29 KRVVLYFYPKADTPGCTVEACEFRDGIKGFN----KKGAIVVGI 68 > slt:Slit_2285 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen Length=160 Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/44 (39%), Positives = 26/44 (59%), Gaps = 4/44 (9%) Query 3 KKFVIFYYADSDYRHFSVEASSFSDAEKTANAFALRVGAIIVGI 46 K V+++Y D ++EA+ FSD E + FA R G I+VG+ Sbjct 35 KNIVLYFYPKDDTPGCTMEANEFSDHE---DEFA-RYGTIVVGV 74 > tms:TREMEDRAFT_65525 hypothetical protein Length=162 Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 0/53 (0%) Query 2 EKKFVIFYYADSDYRHFSVEASSFSDAEKTANAFALRVGAIIVGILSEHLLKN 54 EK +F++ S ++EA SF DA K F IVG+ ++ +K Sbjct 32 EKPLAVFFFPQSGSMGCTIEACSFRDAIKENPVFTRHPDLTIVGVSADLTVKQ 84 > syf:Synpcc7942_1942 bacterioferritin comigratory protein-like protein Length=150 Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query 2 EKKFVIFYYADSDYRHFSVEASSFSDAEKTANAFALRVGAIIVGILSEHL 51 +K V+++Y D ++EA SF D + AF VGA+++G+ S+ + Sbjct 30 QKPVVLYFYPKDDTPGCTIEACSFRD---SYTAFQ-EVGAVVLGVSSDSI 75 > syc:syc2152_c bacterioferritin comigratory protein Length=150 Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query 2 EKKFVIFYYADSDYRHFSVEASSFSDAEKTANAFALRVGAIIVGILSEHL 51 +K V+++Y D ++EA SF D + AF VGA+++G+ S+ + Sbjct 30 QKPVVLYFYPKDDTPGCTIEACSFRD---SYTAFQ-EVGAVVLGVSSDSI 75 Lambda K H a alpha 0.323 0.134 0.364 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 126758474451