bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_9
Length=196
Score E
Sequences producing significant alignments: (Bits) Value
smm:Smp_159270 cln3/battenin 39.7 0.21
dre:447912 vac14, fb68e05, wu:fb68e05, zgc:100945; vac14 homol... 37.7 1.2
bpk:BBK_4643 benB; benzoate 1,2-dioxygenase, small subunit (EC... 35.0 5.2
bpq:BPC006_II2545 benzoate 1,2 dioxygenase, beta subunit 35.0 5.2
bpz:BP1026B_II2042 benB; benzoate 1,2-dioxygenase subunit beta 35.0 5.2
bpsd:BBX_4475 benB; benzoate 1,2-dioxygenase, small subunit (E... 35.0 5.2
bpse:BDL_5310 benB; benzoate 1,2-dioxygenase, small subunit (E... 35.0 5.2
bpl:BURPS1106A_A2582 benB; benzoate 1,2 dioxygenase subunit be... 35.0 5.2
bps:BPSS1904 benB; benzoate 1,2-dioxygenase subunit beta (EC:1... 35.0 5.2
bmal:DM55_3532 benB; benzoate 1,2-dioxygenase, small subunit (... 35.0 5.2
bmn:BMA10247_A0214 benB; benzoate 1,2-dioxygenase beta subunit... 35.0 5.2
bml:BMA10229_1555 benB; benzoate 1,2-dioxygenase subunit beta 35.0 5.2
bmv:BMASAVP1_1359 benB; benzoate 1,2-dioxygenase subunit beta 35.0 5.2
bma:BMAA0186 benB; benzoate 1,2-dioxygenase subunit beta (EC:1... 35.0 5.2
ddi:DDB_G0270810 hypothetical protein 35.8 5.6
ola:101161405 protein VAC14 homolog 35.8 5.8
> smm:Smp_159270 cln3/battenin
Length=263
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 9/61 (15%)
Query 136 YSPDLPTM-MVLFYEGLLKYMKLCNAYYDSLPETSPLRKQLREMYPNLYVGGVSTISDEV 194
Y P + M MV+FYEG L + N +Y+ L ETSP+ ++ Y ++T+SD +
Sbjct 191 YIPHIWIMFMVIFYEGCLGGLTYVNTFYNILQETSPIYRE--------YAMAMATVSDSI 242
Query 195 A 195
Sbjct 243 G 243
> dre:447912 vac14, fb68e05, wu:fb68e05, zgc:100945; vac14 homolog
(S. cerevisiae)
Length=771
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/152 (27%), Positives = 67/152 (44%), Gaps = 24/152 (16%)
Query 21 SISFFSLTRMKSPKIFDR--LYIRVGGLVVSIRNLRGNRLTVMLQTISIALYLFPLFIKP 78
+ISFF+ P DR + + + G+V + + T M+ I++ +L+ L+IK
Sbjct 383 NISFFT------PASSDRSAVTLDLDGIVQVLDRHLHDSSTGMMTRIAVLKWLYHLYIKT 436
Query 79 KSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLME--------------CLIFRIKNLS 124
+ + DSL LK L ES+ + K L L E C I K +
Sbjct 437 PRKMFKHTDSLFPMLLKTLSDESDEVILKDLEVLAEIASSPAGQTDTSGSCDISDSK--T 494
Query 125 DMFPPGRISIDYSPDLPTMMVLFYEGLLKYMK 156
++ PG D SP P+M FY+ ++ +K
Sbjct 495 ELHIPGSKMTDLSPSTPSMNSYFYKFMINLLK 526
> bpk:BBK_4643 benB; benzoate 1,2-dioxygenase, small subunit (EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bpq:BPC006_II2545 benzoate 1,2 dioxygenase, beta subunit
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bpz:BP1026B_II2042 benB; benzoate 1,2-dioxygenase subunit beta
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bpsd:BBX_4475 benB; benzoate 1,2-dioxygenase, small subunit
(EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bpse:BDL_5310 benB; benzoate 1,2-dioxygenase, small subunit
(EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bpl:BURPS1106A_A2582 benB; benzoate 1,2 dioxygenase subunit
beta (EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bps:BPSS1904 benB; benzoate 1,2-dioxygenase subunit beta (EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bmal:DM55_3532 benB; benzoate 1,2-dioxygenase, small subunit
(EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bmn:BMA10247_A0214 benB; benzoate 1,2-dioxygenase beta subunit
(EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bml:BMA10229_1555 benB; benzoate 1,2-dioxygenase subunit beta
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bmv:BMASAVP1_1359 benB; benzoate 1,2-dioxygenase subunit beta
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> bma:BMAA0186 benB; benzoate 1,2-dioxygenase subunit beta (EC:1.14.12.10)
Length=163
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 42/90 (47%), Gaps = 7/90 (8%)
Query 76 IKPKSQFARALDSLTSSDLKKLKKESNMLRTKGLLYLMECLIFRIKNLSDMFPPGRISID 135
IK + A D+ TS ++ +++ES + + L +R K +S F R +ID
Sbjct 75 IKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAID 134
Query 136 YSPDLPTMMVLFYEGLLKYMKLCNAYYDSL 165
+S D P ++ KY+ L N Y + L
Sbjct 135 FSGDAPKIVS-------KYVVLKNDYINQL 157
> ddi:DDB_G0270810 hypothetical protein
Length=787
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/44 (41%), Positives = 25/44 (57%), Gaps = 0/44 (0%)
Query 3 KFIRTLYPSTVQRPFVRISISFFSLTRMKSPKIFDRLYIRVGGL 46
+F+ Y ++ F I I FFSL + KS K+FD LY R+ L
Sbjct 439 EFMFNKYQELQEKEFKSIDIQFFSLCKSKSVKVFDYLYNRLSPL 482
> ola:101161405 protein VAC14 homolog
Length=790
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (43%), Gaps = 27/159 (17%)
Query 21 SISFFSLTRMKSPKIFDRLYIRVGGLVVSIRNLRGNRLTVMLQTISIALYLFPLFIKPKS 80
+ISFF+ + P++ + + G+V + + T M+ I++ +L+ L+IK
Sbjct 385 NISFFTPASTERPQV----NLDLDGIVQVLNRHLHDSSTGMMTRIAVLKWLYHLYIKTPR 440
Query 81 QFARALDSLTSSDLKKLKKESNMLRTKGLLYLME-------------CLIFRIKNLSDMF 127
+ R DSL LK L ES+ + K L L E + NL
Sbjct 441 KMFRHTDSLFPILLKTLSDESDEVILKDLEVLAEIASSPAGQTDQAFSCDSTVNNLVLKV 500
Query 128 P----PGRI------SIDYSPDLPTMMVLFYEGLLKYMK 156
P PG+ ++D SP P+M FY+ ++ +K
Sbjct 501 PQGPKPGQQPSTNPKAVDSSPSTPSMNSYFYKFMINLLK 539
Lambda K H a alpha
0.326 0.141 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 207502776512