bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_8
Length=104
Score E
Sequences producing significant alignments: (Bits) Value
mdm:103449147 ARF guanine-nucleotide exchange factor GNL2-like 40.0 0.040
sly:101247427 scarecrow-like protein 13-like 35.0 1.6
shs:STEHIDRAFT_74565 hypothetical protein 34.7 2.4
tva:TVAG_450310 hypothetical protein 33.9 2.8
sfs:SFyv_3189 60 kDa antigen 33.5 3.5
sfv:SFV_2187 ipaH_5; invasion plasmid antigen 33.9 3.6
sbo:SBO_1026 ipaH_3; invasion plasmid antigen 33.9 3.7
sbo:SBO_0953 ipaH_2; invasion plasmid antigen 33.9 3.7
ssn:SSON_2179 ipaH_4; invasion plasmid antigen 33.9 3.7
sbc:SbBS512_E1016 invasion plasmid antigen 33.9 3.8
ssj:SSON53_12770 invasion plasmid antigen 33.9 3.8
sfv:SFV_2021 ipaH_4; invasion plasmid antigen 33.9 3.8
sfx:S2119 ipaH_5; invasion plasmid antigen 33.9 3.8
sfe:SFxv_2431 Invasion plasmid antigen 33.9 3.9
sfe:SFxv_2256 Invasion plasmid antigen 33.9 3.9
pper:PRUPE_ppa022931mg hypothetical protein 33.9 4.0
pmum:103340952 ARF guanine-nucleotide exchange factor GNL2 33.9 4.1
pdu:PDUR_19120 hypothetical protein 33.1 4.9
pra:PALO_00715 Calcineurin-like phosphoesterase 33.5 5.0
cic:CICLE_v10010624mg hypothetical protein 33.5 5.8
rbo:A1I_04360 hypothetical protein 33.1 5.9
cit:102625158 ARF guanine-nucleotide exchange factor GNL2-like 33.5 6.0
rbe:RBE_0637 hypothetical protein 33.1 6.1
eao:BD94_1613 hypothetical protein 32.3 9.7
> mdm:103449147 ARF guanine-nucleotide exchange factor GNL2-like
Length=1384
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/60 (37%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query 34 SIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKNNTDASGAFPQFKGLLKYVNIRDYQLF 93
S P S L + + FE LV M+ IA+S+ K+N+T SG +P + IR+Y F
Sbjct 428 SFPVASPLTTLQIQAFEGLVIMIHNIADSIDKENDTSPSGPYP--------IEIREYTPF 479
> sly:101247427 scarecrow-like protein 13-like
Length=559
Score = 35.0 bits (79), Expect = 1.6, Method: Composition-based stats.
Identities = 22/82 (27%), Positives = 40/82 (49%), Gaps = 9/82 (11%)
Query 4 HLRLLEADRYKALALRYPNFISKFRPFILRSIPRVS-KLQNFKDEYFEELVWMLPEIAES 62
HL L+ +ALA+ +P ++L +P S N +D + + PEI
Sbjct 376 HLENLQMRHGEALAVNFP--------YVLHHMPDESVTTVNHRDRLLRLVKSLSPEIVTL 427
Query 63 LKKKNNTDASGAFPQFKGLLKY 84
+++++NT+ S P+F+ L Y
Sbjct 428 VEQESNTNTSAFLPRFRETLDY 449
> shs:STEHIDRAFT_74565 hypothetical protein
Length=993
Score = 34.7 bits (78), Expect = 2.4, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (58%), Gaps = 0/40 (0%)
Query 16 LALRYPNFISKFRPFILRSIPRVSKLQNFKDEYFEELVWM 55
A +YPNFI + F+L ++ + ++ +D Y+E W+
Sbjct 261 FAWQYPNFIYAWTAFVLMTLLVILSIRPIRDRYYETFYWL 300
> tva:TVAG_450310 hypothetical protein
Length=213
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (61%), Gaps = 0/33 (0%)
Query 8 LEADRYKALALRYPNFISKFRPFILRSIPRVSK 40
+ AD L+ YPNFI F+P I SI ++SK
Sbjct 33 INADILSRLSASYPNFIESFKPVIKASIIKISK 65
> sfs:SFyv_3189 60 kDa antigen
Length=140
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query 55 MLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDYQLFA 94
MLPE+ +LK+ N +++ A P+ L+Y+N+ D LFA
Sbjct 17 MLPELPRALKELNASSNQLSALPELPVSLEYINVSDNHLFA 57
> sfv:SFV_2187 ipaH_5; invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sbo:SBO_1026 ipaH_3; invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sbo:SBO_0953 ipaH_2; invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> ssn:SSON_2179 ipaH_4; invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sbc:SbBS512_E1016 invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> ssj:SSON53_12770 invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sfv:SFV_2021 ipaH_4; invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sfx:S2119 ipaH_5; invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sfe:SFxv_2431 Invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> sfe:SFxv_2256 Invasion plasmid antigen
Length=547
Score = 33.9 bits (76), Expect = 3.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 2/64 (3%)
Query 32 LRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKN-NTDASGAFPQFKGLLKYVNIRDY 90
LRS+PR+ + + +L MLPE+ +LK+ N +++ A P+ L+Y+N+ D
Sbjct 71 LRSLPRLPDNLDEINVSNNQLS-MLPELPRALKELNASSNQLSALPELPVSLEYINVSDN 129
Query 91 QLFA 94
LFA
Sbjct 130 HLFA 133
> pper:PRUPE_ppa022931mg hypothetical protein
Length=1384
Score = 33.9 bits (76), Expect = 4.0, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 0/44 (0%)
Query 33 RSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKNNTDASGAFP 76
+S P + L + + FE LV M+ IAES+ ++++T SG +P
Sbjct 428 QSFPVSNPLTTIQIQAFEGLVIMIHNIAESIDREHDTSPSGPYP 471
> pmum:103340952 ARF guanine-nucleotide exchange factor GNL2
Length=1387
Score = 33.9 bits (76), Expect = 4.1, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 0/44 (0%)
Query 33 RSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKNNTDASGAFP 76
+S P + L + + FE LV M+ IAES+ ++++T SG +P
Sbjct 428 QSFPVSNPLTTIQIQAFEGLVIMIHNIAESIDREHDTSPSGPYP 471
> pdu:PDUR_19120 hypothetical protein
Length=163
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 16/77 (21%)
Query 2 LEHLRLLEADRYKALALRYPNFISKFRPFIL--RSIPRVSKLQNFKDEYFEELVW-MLPE 58
++H R L +DR K L +Y F+ +F +L RS R +++ W M P
Sbjct 48 IDHPRWLVSDRMKGLLEKYDRFL-RFYSAVLTGRSTQR------------QDIYWFMEPG 94
Query 59 IAESLKKKNNTDASGAF 75
+A+ L ++ DASGA
Sbjct 95 VADCLSERTQVDASGAL 111
> pra:PALO_00715 Calcineurin-like phosphoesterase
Length=798
Score = 33.5 bits (75), Expect = 5.0, Method: Composition-based stats.
Identities = 25/81 (31%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query 13 YKALALRYPNFISKFRPFILRSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKNNTDAS 72
Y L +Y NF +RP ILR+ P V+ + N E + P + + N+ A+
Sbjct 394 YDVLGTQYENF---YRPDILRTQPLVTTIGNHDISPIYENFFGRPNVDKKYGAGNSEQAN 450
Query 73 GAF-PQFKGLLKYVNIRDYQL 92
G + +F G+L +VNI L
Sbjct 451 GDYWFKFNGIL-FVNINSNDL 470
> cic:CICLE_v10010624mg hypothetical protein
Length=1444
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (57%), Gaps = 0/44 (0%)
Query 33 RSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKNNTDASGAFP 76
S P L + + + FE LV ++ IAES+ K+ +T SG +P
Sbjct 487 HSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEGDTSPSGPYP 530
> rbo:A1I_04360 hypothetical protein
Length=292
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 16/78 (21%)
Query 7 LLEADRYKA--LALRYPNFISKFRPFILRSIPRVSKLQNFKDEY-----FEELVWMLPEI 59
+L +D+YK L +PNF+S R ++IP ++ F + FE +W I
Sbjct 96 ILTSDKYKKELLDSNFPNFVSDIRN---KNIPIIAVNGGFTGNFNNIPKFE--IW----I 146
Query 60 AESLKKKNNTDASGAFPQ 77
A+ LKK N D S +FP+
Sbjct 147 ADYLKKNFNIDFSNSFPK 164
> cit:102625158 ARF guanine-nucleotide exchange factor GNL2-like
Length=1380
Score = 33.5 bits (75), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (57%), Gaps = 0/44 (0%)
Query 33 RSIPRVSKLQNFKDEYFEELVWMLPEIAESLKKKNNTDASGAFP 76
S P L + + + FE LV ++ IAES+ K+ +T SG +P
Sbjct 423 HSFPVSGPLTSSQIQAFEGLVILIHNIAESIDKEGDTSPSGPYP 466
> rbe:RBE_0637 hypothetical protein
Length=336
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 16/78 (21%)
Query 7 LLEADRYKA--LALRYPNFISKFRPFILRSIPRVSKLQNFKDEY-----FEELVWMLPEI 59
+L +D+YK L +PNF+S R ++IP ++ F + FE +W I
Sbjct 140 ILTSDKYKKELLDSNFPNFVSDIRN---KNIPIIAVNGGFTGNFNNIPKFE--IW----I 190
Query 60 AESLKKKNNTDASGAFPQ 77
A+ LKK N D S +FP+
Sbjct 191 ADYLKKNFNIDFSNSFPK 208
> eao:BD94_1613 hypothetical protein
Length=141
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/46 (37%), Positives = 27/46 (59%), Gaps = 2/46 (4%)
Query 15 ALALRYPNFISKFRPFI--LRSIPRVSKLQNFKDEYFEELVWMLPE 58
+L L +P F K RP++ + IP +S+ + D+Y E VW+ PE
Sbjct 92 SLCLYHPVFDLKGRPYLDLVEVIPWISEWIYYYDKYLEYKVWLGPE 137
Lambda K H a alpha
0.325 0.140 0.406 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 126554967858