bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-36_CDS_annotation_glimmer3.pl_2_3
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
cpt:CpB0227 hypothetical protein 44.3 0.004
cpj:CPj0222 hypothetical protein 44.3 0.004
cpa:CP0543 hypothetical protein 44.3 0.004
cpn:CPn0222 hypothetical protein 44.3 0.004
clp:CPK_ORF00729 hypothetical protein 43.9 0.005
tne:Tneu_0188 glycerophosphoryl diester phosphodiesterase 41.6 0.11
ckr:CKR_3320 anaerobic ribonucleoside triphosphate reductase 39.7 0.80
ckl:CKL_3757 nrdD; anaerobic ribonucleoside triphosphate reduc... 39.7 0.80
sri:SELR_11130 hypothetical protein 38.5 1.2
npu:Npun_R1043 hypothetical protein 36.6 1.8
hro:HELRODRAFT_177803 hypothetical protein 37.4 4.1
ctet:BN906_00261 anaerobic ribonucleoside triphosphate reductase 37.4 4.1
clj:CLJU_c01840 nrdD; anaerobic ribonucleoside-triphosphate re... 37.4 4.1
cah:CAETHG_2287 anaerobic ribonucleoside-triphosphate reductas... 37.4 4.5
hro:HELRODRAFT_193196 hypothetical protein 37.0 5.7
cfa:478895 ACADL; acyl-CoA dehydrogenase, long chain 36.6 7.7
> cpt:CpB0227 hypothetical protein
Length=113
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (6%)
Query 37 DDKRKKAVAIGCGKCIECRKKRANEWRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEE 96
++ R + V + C KC CR + A W R + E + +N F+T+TY D+ L ++
Sbjct 13 EEYRNRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYG--- 68
Query 97 ALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGIL 142
S+ ++LF KR K + C G QR H H +L
Sbjct 69 --SLVKLHLQLFLKRLRKMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> cpj:CPj0222 hypothetical protein
Length=113
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (6%)
Query 37 DDKRKKAVAIGCGKCIECRKKRANEWRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEE 96
++ R + V + C KC CR + A W R + E + +N F+T+TY D+ L ++
Sbjct 13 EEYRNRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYG--- 68
Query 97 ALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGIL 142
S+ ++LF KR K + C G QR H H +L
Sbjct 69 --SLVKLHLQLFLKRLRKMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> cpa:CP0543 hypothetical protein
Length=113
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (6%)
Query 37 DDKRKKAVAIGCGKCIECRKKRANEWRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEE 96
++ R + V + C KC CR + A W R + E + +N F+T+TY D+ L ++
Sbjct 13 EEYRNRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYG--- 68
Query 97 ALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGIL 142
S+ ++LF KR K + C G QR H H +L
Sbjct 69 --SLVKLHLQLFLKRLRKMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> cpn:CPn0222 hypothetical protein
Length=113
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (6%)
Query 37 DDKRKKAVAIGCGKCIECRKKRANEWRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEE 96
++ R + V + C KC CR + A W R + E + +N F+T+TY D+ L ++
Sbjct 13 EEYRNRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYG--- 68
Query 97 ALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGIL 142
S+ ++LF KR K + C G QR H H +L
Sbjct 69 --SLVKLHLQLFLKRLRKMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/111 (28%), Positives = 51/111 (46%), Gaps = 6/111 (5%)
Query 37 DDKRKKAVAIGCGKCIECRKKRANEWRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEE 96
++ R + V + C KC CR + A W R + E + +N F+T+TY D+ L ++
Sbjct 13 EEYRNRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYG--- 68
Query 97 ALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGILWTEKS 147
S+ ++LF KR R + C G QR H H +++ S
Sbjct 69 --SLVKLHLQLFLKRLRDRISPHKIRYFGCGEYGTKLQRPHYHLLIFNYDS 117
> tne:Tneu_0188 glycerophosphoryl diester phosphodiesterase
Length=227
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/115 (29%), Positives = 50/115 (43%), Gaps = 23/115 (20%)
Query 63 RVRLMIELKDHPENAHFVTMTYSDESLSKFE-----QEEALSVASRSIELFRKRWY---- 113
RV +++E+K HPE+AH V T + +++ EEAL R ++L+R Y
Sbjct 102 RVGVLVEVK-HPEDAHIVARTIREAGAARWTAVISFHEEAL----RGVDLYRGLIYAKPP 156
Query 114 ------KRYKCGI---KHFLICELGGNDSQRMHLHGILWTEKSKEEVEEVWGYGF 159
KR C I H L E + +M L+ + WT S +W G
Sbjct 157 GRVVDAKRLGCHIVLPHHALATERAVALAHKMGLYVVAWTVNSPATARRLWEIGV 211
> ckr:CKR_3320 anaerobic ribonucleoside triphosphate reductase
Length=701
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (55%), Gaps = 1/73 (1%)
Query 169 KTVNYIVKYIFK-VDEKHPDFVTKVWTSKGIGREYAESEGKCFNKFKGISTKDYYRMPSG 227
K ++YI KY K +++ H ++ ++G+ ++ + K F + GI+ KDYY
Sbjct 516 KIISYIRKYTDKFIEQTHLNWSCYATPAEGLSGKFILQDKKIFGEIHGITDKDYYTNSYH 575
Query 228 LKVALPIYIRNKI 240
+ V PI I++KI
Sbjct 576 IPVGFPISIKDKI 588
> ckl:CKL_3757 nrdD; anaerobic ribonucleoside triphosphate reductase
Length=701
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (55%), Gaps = 1/73 (1%)
Query 169 KTVNYIVKYIFK-VDEKHPDFVTKVWTSKGIGREYAESEGKCFNKFKGISTKDYYRMPSG 227
K ++YI KY K +++ H ++ ++G+ ++ + K F + GI+ KDYY
Sbjct 516 KIISYIRKYTDKFIEQTHLNWSCYATPAEGLSGKFILQDKKIFGEIHGITDKDYYTNSYH 575
Query 228 LKVALPIYIRNKI 240
+ V PI I++KI
Sbjct 576 IPVGFPISIKDKI 588
> sri:SELR_11130 hypothetical protein
Length=288
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (55%), Gaps = 11/93 (12%)
Query 73 HPENAHFVTMTYSDESLSKFEQEEALSVASRSIELFRKRW-YKRYKCG---IKHFLICEL 128
H ++ H VT+TY DE+ + L +A +++E + +R Y R K G +++ + E
Sbjct 71 HKDDLH-VTVTYDDEN-----RPADLKMAMKAVENYIRRLNYTRSKAGLSSVRYVCVTEE 124
Query 129 GGNDSQRMHLHGILWTEKSKEEVEEVWGYGFVD 161
G + R+H H I+ + ++ VE+ WG G+ +
Sbjct 125 GATNG-RIHHHFIMDGDLDRDTVEKRWGLGYCN 156
> npu:Npun_R1043 hypothetical protein
Length=135
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (37%), Positives = 26/57 (46%), Gaps = 1/57 (2%)
Query 139 HGILWTEKSKEEVEEVWGYGFVDYGEFVNEKTVNYIVKYIFKVDEKHP-DFVTKVWT 194
+G WTE E VE WGYG + T+ IV Y F D K P + +WT
Sbjct 39 NGFSWTEGQLEGVELGWGYGLAAAVFVILPTTLIGIVAYYFPADLKEPITWTPYIWT 95
> hro:HELRODRAFT_177803 hypothetical protein
Length=599
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/55 (35%), Positives = 28/55 (51%), Gaps = 6/55 (11%)
Query 62 WRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEEALSVASRSIELFRKRWYKRY 116
W R I L HP N H + +TYSD +S+F+ V+ S+ K W K++
Sbjct 440 WNERSCINLDYHPANPHLILLTYSDGRISEFD------VSLGSLTPISKSWNKKH 488
> ctet:BN906_00261 anaerobic ribonucleoside triphosphate reductase
Length=704
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 20/119 (17%)
Query 142 LWTEKSKEEV--EEVWGYGFVD------------YGEFVNEKTVNY-IVKYIFKVDEKHP 186
L E S E + + WG GF+ +GE +T+ I+K+I + +K
Sbjct 470 LQPEDSIEPILKQGTWGIGFIGLAETLKALIGQHHGESEKARTLGLKIIKHIREFTDKIT 529
Query 187 DFVTKVWT-----SKGIGREYAESEGKCFNKFKGISTKDYYRMPSGLKVALPIYIRNKI 240
+ W+ ++G+ ++ + K F + KG++ KDYY + V PI I+ KI
Sbjct 530 EETKLNWSCYATPAEGLSGKFIVQDKKIFGEIKGVTDKDYYTNSFHIPVGYPISIKAKI 588
> clj:CLJU_c01840 nrdD; anaerobic ribonucleoside-triphosphate
reductase (EC:1.17.4.2)
Length=701
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/174 (23%), Positives = 73/174 (42%), Gaps = 24/174 (14%)
Query 89 LSKFEQEEALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGI--LWTEK 146
LSK + + +EL R+ RY +K + +L Q++ + G L +E
Sbjct 417 LSKGNVSKFFGLLQGKLELARESLMHRYGI-LKRLRVKDLPFVAGQKL-MKGAENLKSED 474
Query 147 SKEEV--EEVWGYGFVDYGEFV-----------------NEKTVNYIVKYIFK-VDEKHP 186
S E + + W GF+ E + K + YI Y K ++E H
Sbjct 475 SIEPILKQGTWAIGFIGLAETLIALTGKHHGEDESSRELGIKIITYIRNYTDKLIEETHL 534
Query 187 DFVTKVWTSKGIGREYAESEGKCFNKFKGISTKDYYRMPSGLKVALPIYIRNKI 240
++ ++G+ ++ + K F + G++ K+YY + V PI I++KI
Sbjct 535 NWSCYATPAEGLSGKFIVHDKKIFGEIPGVTDKEYYTNSYHIPVGYPISIKDKI 588
> cah:CAETHG_2287 anaerobic ribonucleoside-triphosphate reductase
(EC:1.17.4.2)
Length=701
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/174 (23%), Positives = 73/174 (42%), Gaps = 24/174 (14%)
Query 89 LSKFEQEEALSVASRSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGI--LWTEK 146
LSK + + +EL R+ RY +K + +L Q++ + G L +E
Sbjct 417 LSKGNVSKFFGLLQGKLELARESLMHRYGI-LKRLRVKDLPFVAGQKL-MKGAENLKSED 474
Query 147 SKEEV--EEVWGYGFVDYGEFV-----------------NEKTVNYIVKYIFK-VDEKHP 186
S E + + W GF+ E + K + YI Y K ++E H
Sbjct 475 SIEPILKQGTWAIGFIGLAETLIALTGKHHGEDESSRELGIKIITYIRNYTDKLIEETHL 534
Query 187 DFVTKVWTSKGIGREYAESEGKCFNKFKGISTKDYYRMPSGLKVALPIYIRNKI 240
++ ++G+ ++ + K F + G++ K+YY + V PI I++KI
Sbjct 535 NWSCYATPAEGLSGKFIVHDKKIFGEIPGVTDKEYYTNSYHIPVGYPISIKDKI 588
> hro:HELRODRAFT_193196 hypothetical protein
Length=499
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (10%)
Query 54 CRKKRANEWRVRLMIELKDHPENAHFVTMTYSDESLSKFEQEEALSVASRSIELFRKRWY 113
C+ W R I L HP N H + +TYSD +S+F+ V+ S+ K W
Sbjct 332 CKILHQLPWNERSCINLDYHPANPHLILLTYSDGRISEFD------VSLGSLTPISKSWS 385
Query 114 KRY 116
++
Sbjct 386 NKH 388
> cfa:478895 ACADL; acyl-CoA dehydrogenase, long chain
Length=437
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (46%), Gaps = 13/135 (10%)
Query 87 ESLSKFEQEEALSVAS---RSIELFRKRWYKRYKCGIKHFLICELGGNDSQRMHLHGILW 143
ES+ KF QEE + + ++ E+ R+ W K K G+ I E G ++ I+W
Sbjct 69 ESVRKFFQEEVVPYHAEWEKAGEVSRELWEKAGKVGLLGVNIAEHHGGIGGDLYSTAIIW 128
Query 144 TEKSKEEVEEVWGYGFVDYGEFVNEKTVNYIVKYIFKVDEKHPDFVTKVWTSKGIGREYA 203
E++ G GF + + V + YI KY + KH F+ ++ + K IG A
Sbjct 129 EEQAYSNCS---GPGFSLHSDIV----MPYITKYGSEEQIKH--FIPQMVSGKCIG-AIA 178
Query 204 ESEGKCFNKFKGIST 218
+E + +GI T
Sbjct 179 MTEPGAGSDLQGIKT 193
Lambda K H a alpha
0.320 0.138 0.429 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 562516025412