bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-19_CDS_annotation_glimmer3.pl_2_6

Length=54
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  pte:PTT_07238  hypothetical protein                                 32.0    7.5


> pte:PTT_07238  hypothetical protein
Length=482

 Score = 32.0 bits (71),  Expect = 7.5, Method: Composition-based stats.
 Identities = 17/35 (49%), Positives = 22/35 (63%), Gaps = 2/35 (6%)

Query  1    MKEKKYFFAVLHYMGGKRRVAIRLDSAVIDSYLKA  35
            +K  +Y FA    M  KR+ AIRLDS++ D  LKA
Sbjct  135  LKSAQYAFA--DEMNSKRQGAIRLDSSIYDQVLKA  167



Lambda      K        H        a         alpha
   0.324    0.142    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127911952116