bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-18_CDS_annotation_glimmer3.pl_2_2 Length=101 Score E Sequences producing significant alignments: (Bits) Value pol:Bpro_2918 adenylate cyclase 35.8 0.85 mze:101481826 titin-like 33.1 8.2 nir:NSED_03355 SMC domain-containing protein 32.7 9.5 > pol:Bpro_2918 adenylate cyclase Length=508 Score = 35.8 bits (81), Expect = 0.85, Method: Composition-based stats. Identities = 20/84 (24%), Positives = 42/84 (50%), Gaps = 2/84 (2%) Query 9 LLAESGKKEEEIKNVNLEIEERKVSKNGIFVLIRNKNNKWVITMCGSLVNAKEFDTKEEA 68 LLA +++ N+ + +R++++ GI + +R +W+ T+ G + +EE Sbjct 34 LLAPVRATHKQLDNIYFDTPQRRLARAGIALRLRRDGRRWLQTVKGGSNSQAGLHQREEI 93 Query 69 EEHIAKK--EWEDILTAAFIFILR 90 E +A EW+ + AF +L+ Sbjct 94 EFSVAGPALEWKPLAGTAFEPVLK 117 > mze:101481826 titin-like Length=31911 Score = 33.1 bits (74), Expect = 8.2, Method: Composition-based stats. Identities = 23/72 (32%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query 8 QLLAESGKKE--EEIKNVNLEIEERKVSKNGIFVLIRNKNNKWVITMCG-SLVNAKEFDT 64 ++L++ GK E E+ + +LEI E + S +G++ + V TMC S+ +K T Sbjct 31440 KVLSQGGKYELFEDSGSAHLEIYELEASDSGVYKCTATNSAGAVSTMCTVSVQGSKSSKT 31499 Query 65 KEEAEEHIAKKE 76 K E E + K+E Sbjct 31500 KAEISEEVVKRE 31511 > nir:NSED_03355 SMC domain-containing protein Length=1176 Score = 32.7 bits (73), Expect = 9.5, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 10/65 (15%) Query 11 AESGKKEEEIKNVNLE----------IEERKVSKNGIFVLIRNKNNKWVITMCGSLVNAK 60 ++S + E+E K++N+E +E++K KN I V +R K + + T S+ + K Sbjct 839 SQSDRLEDESKSLNIERQELETKIQELEKQKEPKNAILVSLREKEQELIATSGSSIGHLK 898 Query 61 EFDTK 65 EFD K Sbjct 899 EFDDK 903 Lambda K H a alpha 0.311 0.129 0.348 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127879331103