bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-14_CDS_annotation_glimmer3.pl_2_7 Length=222 Score E Sequences producing significant alignments: (Bits) Value ach:Achl_3385 Exo-alpha-sialidase (EC:3.2.1.18) 37.7 1.4 rsl:RPSI07_1868 polyketide synthase 36.6 4.6 ppw:PputW619_2566 gluconate 2-dehydrogenase (EC:1.1.99.3) 35.8 6.0 > ach:Achl_3385 Exo-alpha-sialidase (EC:3.2.1.18) Length=558 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/80 (33%), Positives = 36/80 (45%), Gaps = 3/80 (4%) Query 30 EAIIRGKGIGGYRVNKPETFKTTEHGVLMCIYHAVPLLDYAPTGPDLQFMTTVD-GDSWP 88 E ++ +G GGYR + T HG ++ Y P LD P+ DL + D G +W Sbjct 9 EHVLALRGRGGYRQYRIPALAVTTHGTVLAAYDGRPNLDDLPSPIDLLIRRSTDSGQTWG 68 Query 89 VPEL--DSVGFEELPSYSLL 106 E+ G E L SLL Sbjct 69 GQEVVRSGTGLEGLGDPSLL 88 > rsl:RPSI07_1868 polyketide synthase Length=2386 Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 22/82 (27%), Positives = 34/82 (41%), Gaps = 9/82 (11%) Query 40 GYRVNKPETFKTTEHGVLMCIYHAVPLLDYAPTGPDLQFMTTVDGDSWPVPELDSVGFEE 99 GY + ET + LMC + A+ + Y P G + +S P + +G + Sbjct 90 GYSRQEAETIDPQQRIFLMCAWEALEMAGYPPAGLE---------NSCPGARIGVLGACK 140 Query 100 LPSYSLLNTSDVQPIKEPRPFG 121 + SY + Q I PR FG Sbjct 141 MSSYPAARLENTQEIASPRTFG 162 > ppw:PputW619_2566 gluconate 2-dehydrogenase (EC:1.1.99.3) Length=415 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 0/67 (0%) Query 88 PVPELDSVGFEELPSYSLLNTSDVQPIKEPRPFGYVPRYISWKTSVDVVRGAFIDTLKSW 147 P P V E++ + VQP+ +P +P +S + + + RG F +K+W Sbjct 104 PYPSYARVKDEDMRALYAYFMQGVQPVAQPNKATDIPWPLSMRWPLAIWRGVFAPEVKAW 163 Query 148 TAPIGED 154 AP G D Sbjct 164 QAPAGAD 170 Lambda K H a alpha 0.320 0.140 0.447 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 282809995864