bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-4_CDS_annotation_glimmer3.pl_2_3

Length=569
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   407   1e-131


> 483216.BACEGG_02721
Length=578

 Score =   407 bits (1045),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 230/595 (39%), Positives = 343/595 (58%), Gaps = 52/595 (9%)

Query  1    VKNHPRRSGFDLSSKVAFTAKVGELLPVKWCLTMPGDKFSLSEQHFTRTQPVNTSAYTRV  60
            ++N P R+GFDLS K  FTAK GELLPV     +PGD F ++ + FTRTQPVNT+A+ R+
Sbjct  10   IRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQPVNTAAFARI  69

Query  61   REYYDWFWCPLHLLWRNAPEVIAQIQQNVQHASSYDGS--VLLGSNMPCVSLSQLSKLLS  118
            REYYD+F+ P  LLW  A  V+ Q+  N QHA S D +   +L   MP ++   ++  ++
Sbjct  70   REYYDFFFVPYDLLWNKANTVLTQMYDNPQHAVSIDPTRNFVLSGEMPYMTSEAIASYIN  129

Query  119  SLKG-------KKNYFGFDRSDLAYKILQYLRYGNVQTSSSTSGKNFGTSIPLSDRSYSQ  171
            +L         K NYFG++RS  + K+L+YL YGN ++              L+D   + 
Sbjct  130  ALSTASALADYKSNYFGYNRSKSSVKLLEYLGYGNYESF-------------LTDDWNTA  176

Query  172  DYVFNHALSIFPLLGYKKFCQDYFRFTQWQDSAPYLWNIDYYDAKKSTSILPDTFSTSYL  231
              + N   +IF LL Y+K   D++R +QW+  +P  +N+DY D   S+  L + +ST + 
Sbjct  177  PLMANLNHNIFGLLAYQKIYSDFYRDSQWERVSPSTFNVDYLDG--SSMNLDNAYSTEFY  234

Query  232  THNTLIDMEYCNWNKDMFFGVLPDAQYGDASVVDISFGMSGQTVVASPSDISSRYTISNP  291
             +    D+ YCNW KD+F GVLP  QYG+ +V  I+  ++G+  +++ S + +  T +  
Sbjct  235  QNYNFFDLRYCNWQKDLFHGVLPHQQYGETAVASITPDVTGKLTLSNFSTVGTSPTTA--  292

Query  292  SDSSTPNLSGSPLV--LDVLALRRGEALQRFREISLCTPANYRSQIKAHFGVDVGSELSG  349
            S ++T NL     V  L +L LR+ E LQ+++EI+     +Y+ Q++ H+GV VG   S 
Sbjct  293  SGTATKNLPAFDTVGDLSILVLRQAEFLQKWKEITQSGNKDYKDQLEKHWGVSVGDGFSE  352

Query  350  MSTYIGGEASSLDISEVVNTNITESNEALIAGKGIGTGQFSDKFYAKD-WGILMCIYHSV  408
            + TY+GG +SS+DI+EV+NTNIT S  A IAGKG+G       F +   +G++MCIYH +
Sbjct  353  LCTYLGGVSSSIDINEVINTNITGSAAADIAGKGVGVANGEINFNSNGRYGLIMCIYHCL  412

Query  409  PLLDYVLTSPDPQLFLSENTSFPVPELDAIGLESIPLSCYSNSSLEIPITNP---NVDAA  465
            PLLDY     DP      +T + +PE D +G++S+PL         + + NP     +A+
Sbjct  413  PLLDYTTDMLDPAFLKVNSTDYAIPEFDRVGMQSMPL---------VQLMNPLRSFANAS  463

Query  466  SLTMGYLPRYYAWKTSLDYVLGAFTTTEKEWVAPI-TASLWSKMLLPVTV----------  514
             L +GY+PRY  +KTS+D  +G F  T   WV      S+  ++ LP             
Sbjct  464  GLVLGYVPRYIDYKTSVDQSVGGFKRTLNSWVISYGNISVLKQVTLPNDAPPIEPSEPVP  523

Query  515  DGSGINYNFFKVNPSILDPIFLVNADSTWDTDTFLVNAAFDIRVARNLDYDGMPY  569
              + +N+ FFKVNP  LDPIF V A    +TD FL ++ FDI+  RNLD DG+PY
Sbjct  524  SVAPMNFTFFKVNPDCLDPIFAVQAGDDTNTDQFLCSSFFDIKAVRNLDTDGLPY  578



Lambda      K        H        a         alpha
   0.318    0.134    0.409    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1253193666560