bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-4_CDS_annotation_glimmer3.pl_2_1 Length=128 Score E Sequences producing significant alignments: (Bits) Value 439386.YG5714_0844 35.0 0.88 > 439386.YG5714_0844 Length=93 Score = 35.0 bits (79), Expect = 0.88, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (55%), Gaps = 4/55 (7%) Query 61 LKNQLSLQELVFAELGYSDELFDSFYVKPHIKVLKNAYIDKWKDVNYKEVHYFRV 115 + +L L EL AE+ YS+E VK + K +K +DKW+ VN+ YFR Sbjct 40 IAEELKLNEL-KAEITYSEEATTYVEVKLYKKAIKGTLLDKWRRVNF---SYFRC 90 Lambda K H a alpha 0.326 0.142 0.430 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 126286113980