bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-40_CDS_annotation_glimmer3.pl_2_1

Length=297
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  215689.EJP617_31160                                                 35.8    8.5


> 215689.EJP617_31160
Length=346

 Score = 35.8 bits (81),  Expect = 8.5, Method: Compositional matrix adjust.
 Identities = 42/136 (31%), Positives = 71/136 (52%), Gaps = 11/136 (8%)

Query  1    MAFSLLG--ALGTIGNVAG-TVGTVANAVGALGNAFGAW-GQVGQSQSQGGSTQQGGGSS  56
            +  ++LG  A+G + N AG  VG +A+A G++ +  G+  GQ  Q     G    G    
Sbjct  99   LVATILGFAAVGGVLNTAGNAVGGIASATGSMASGIGSVAGQAAQGAGNMGEKIYGRLGL  158

Query  57   QSMSKSGTNDEQVMQYLKGAYQYQNAEGQRQSQFNQRSMLEQMGYNTLGAIAQGIYNHIE  116
             +  +S   D+QVM+ LK     ++   + Q ++ Q S LE  G + L + A+ + +H E
Sbjct  159  DTRLQSQDADQQVMEALK-----KSGIKELQPEYLQ-SQLEAAG-DDLASAAKNLASHPE  211

Query  117  NSAAMNFNSTEAMKNR  132
            NS A+  + TE +K+R
Sbjct  212  NSDAIVNSLTEKLKSR  227



Lambda      K        H        a         alpha
   0.308    0.124    0.353    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 486504089850