bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-39_CDS_annotation_glimmer3.pl_2_1

Length=290
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  484018.BACPLE_00805                                                 61.6    6e-08


> 484018.BACPLE_00805
Length=545

 Score = 61.6 bits (148),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 45/79 (57%), Gaps = 7/79 (9%)

Query  180  MLPELAESLKKKNNTDANGAFPQFKGLLKYINIRDYQLFSKRLRKYLSKKIGKYEKIHSY  239
            M P+L    +K+ N   N     +KG   Y++ R+ QLF KRLRKYL K  G  +KI  +
Sbjct  96   MTPQLMNEYQKRVNYRIN-----YKGRFPYLSKRELQLFMKRLRKYLDKYEG--QKIRFF  148

Query  240  VVSEYSPKTLRPHFHILFF  258
               EY P + RPHFHIL F
Sbjct  149  ATGEYGPLSFRPHFHILLF  167


 Score = 52.4 bits (124),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 31/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (3%)

Query  9    FNKCENPRIIQNKYTGDFVKVDCGECPYCLIKKSDRATQKCDFVKFNHKYCYFVTLTYNS  68
            F  C  P+ I+NKYTG+ + V C  C  C   ++ + +  CDF     K   F+TLT++ 
Sbjct  5    FVSCLEPQRIKNKYTGEEMVVACKHCVACEQLRNFKYSNLCDFESLTAKKTVFLTLTFDD  64

Query  69   EYVPKMSLTQIDDYLTEWLPVRPPKSIGTQLVARMVMDS---RVNKKI  113
            ++VP+    ++ D           + +G  L+   +M+    RVN +I
Sbjct  65   KFVPQFRFYKVGDDEYIMRDADTGEYLGRTLMTPQLMNEYQKRVNYRI  112



Lambda      K        H        a         alpha
   0.324    0.139    0.433    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 465085670800