bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-36_CDS_annotation_glimmer3.pl_2_2 Length=358 Score E Sequences producing significant alignments: (Bits) Value 5911.EAR95443 38.1 2.8 > 5911.EAR95443 Length=838 Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust. Identities = 46/217 (21%), Positives = 93/217 (43%), Gaps = 35/217 (16%) Query 33 GIGNRKRAKRQLENQIKLNEAANESNYRWGEKAAENAFKRQMEAYERSYKDQSYAAMRKQ 92 I NRK+ +Q IK + +E +++ + FK E+Y S+ Y+ + + Sbjct 598 AIFNRKKECKQQFFAIKSQQQKDEF-FKYAQ-----TFKNLDESYNSSH-SLGYSYLTQS 650 Query 93 MEEAGLSTGL-----MYGGSGSGGGSGFMTQGPMGQAHGANAGKADSPAEQWAMRANQIE 147 +E S+ + ++ GS G + F +Q P+ + K P Q + +I+ Sbjct 651 QQENEESSVIQNNNSVFFGSTEGRNNTFKSQNPISEQ------KIKKPLSQTCLSKIEID 704 Query 148 LGLNLANLKKQGEVL---------DSQAEQNRASASKTTEEAQTEREMREGKVKEIFQRG 198 L LA +K+ +L DS ++N + ++ + R+ + +FQRG Sbjct 705 LNPQLAEERKKKSILSFKINSEINDSHMDKNYLKREPSDQDITKQEAQRKNLNRFLFQRG 764 Query 199 KSQYIDNVRKMFEDMAIEDN------DRWGVEVYDDF 229 + Y+ + +FE +++N + W E ++F Sbjct 765 R--YLKQAKPVFEVSQMQNNFYEQEDNPWLFESLENF 799 Lambda K H a alpha 0.310 0.126 0.349 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 660545033620