bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_4

Length=343
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  138677.CPj0222                                                      41.2    0.043


> 138677.CPj0222
Length=113

 Score = 41.2 bits (95),  Expect = 0.043, Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 46/110 (42%), Gaps = 10/110 (9%)

Query  27   PDE-RLRYVTAACGDCYECRKQKQRQWMVRMSEENRQTPNAYFLTLTIDDKSYKQIKQKY  85
            P+E R R+V   C  C  CR Q  + W  R   E        FLTLT DDK         
Sbjct  12   PEEYRNRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNCFLTLTYDDK---------  62

Query  86   NLKDNNDIATKAIRLCLERVRKLTGKSVKHWFITELGHEKTERLHLHGIV  135
            +L     +    ++L L+R+RK+       +F       K +R H H ++
Sbjct  63   HLPQYGSLVKLHLQLFLKRLRKMISPHKIRYFECGAYGTKLQRPHYHLLL  112



Lambda      K        H        a         alpha
   0.319    0.137    0.416    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 615094687270